RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 SRSF1Q07955 248 aaKnown RBP eCLIP5.04□□□□□ -1.6
SNX25-206ENST00000513433 CYP24A1Q07973 514 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 FHL1Q13642 323 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 BTG3Q14201 252 aaPredicted RBP5.04□□□□□ -1.6
SNX25-206ENST00000513433 PSMD6Q15008 389 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 NAB2Q15742 525 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 ZSCAN23Q3MJ62 389 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 ISM2Q6H9L7 571 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 KLHL10Q6JEL2 608 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 SASS6Q6UVJ0 657 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 C11orf57Q6ZUT1 292 aaPredicted RBP5.04□□□□□ -1.6
SNX25-206ENST00000513433 TMCO2Q7Z6W1 182 aaPredicted RBP5.04□□□□□ -1.6
SNX25-206ENST00000513433 CBWD2Q8IUF1 395 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 WDR49Q8IV35 697 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 CD302Q8IX05 232 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 C16orf52Q8NHV5 167 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 VCPIP1Q96JH7 1222 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 ZMAT2Q96NC0 199 aaKnown RBP5.04□□□□□ -1.6
SNX25-206ENST00000513433 GAD1Q99259 594 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 FAM213AQ9BRX8 229 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 APOL6Q9BWW8 343 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 ADGRE3Q9BY15 652 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 ASB7Q9H672 318 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 RPF1Q9H9Y2 349 aaKnown RBP5.04□□□□□ -1.6
SNX25-206ENST00000513433 SARS2Q9NP81 518 aaKnown RBP5.04□□□□□ -1.6
SNX25-206ENST00000513433 SCN1AP35498 2009 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 GPR179Q6PRD1 2367 aa5.04□□□□□ -1.6
SNX25-206ENST00000513433 A0A087WWL8 130 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 A0A088AWK7 358 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 SMIM28A0A1B0GU29 152 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 GOLGA8IPA6NC78 632 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 GOLGA8JA6NMD2 632 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 TMEM189-UBE2V1I3L0A0 370 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 SOCS2O14508 198 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 CETN3O15182 167 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 CLIC2O15247 247 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 ZC3H11AO75152 810 aaKnown RBP eCLIP5.03□□□□□ -1.6
SNX25-206ENST00000513433 CAVIN2O95810 425 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 GNA14O95837 355 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 ALDH2P05091 517 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 EPB41P11171 864 aaKnown RBP5.03□□□□□ -1.6
SNX25-206ENST00000513433 CYP3A5P20815 502 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 IBSPP21815 317 aaPredicted RBP5.03□□□□□ -1.6
SNX25-206ENST00000513433 PPM1AP35813 382 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 PSMC2P35998 433 aaKnown RBP5.03□□□□□ -1.6
SNX25-206ENST00000513433 SLC11A2P49281 568 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 CASP4P49662 377 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 RNASELQ05823 741 aaKnown RBP5.03□□□□□ -1.6
SNX25-206ENST00000513433 BFSP1Q12934 665 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 RAPGEF1Q13905 1077 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 TMEM132DQ14C87 1099 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 ZBTB6Q15916 424 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 ZIK1Q3SY52 487 aaPredicted RBP5.03□□□□□ -1.6
SNX25-206ENST00000513433 RNASE12Q5GAN4 147 aaKnown RBP5.03□□□□□ -1.6
SNX25-206ENST00000513433 KHDC1LQ5JSQ8 128 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 GLRA4Q5JXX5 417 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 SPATA1Q5VX52 437 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 ANKRD40Q6AI12 368 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 JADE1Q6IE81 842 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 INTS8Q75QN2 995 aaKnown RBP5.03□□□□□ -1.6
SNX25-206ENST00000513433 EFCAB13Q8IY85 973 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 FAM186BQ8IYM0 893 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 SAMD14Q8IZD0 417 aaPredicted RBP5.03□□□□□ -1.6
SNX25-206ENST00000513433 CSGALNACT2Q8N6G5 542 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 TIFAQ96CG3 184 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 MTFMTQ96DP5 389 aaKnown RBP5.03□□□□□ -1.6
SNX25-206ENST00000513433 C1GALT1C1Q96EU7 318 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 CGRRF1Q99675 332 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 FAM118BQ9BPY3 351 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 BPIFA3Q9BQP9 254 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 TMEM175Q9BSA9 504 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 DPH1Q9BZG8 443 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 NAT10Q9H0A0 1025 aaKnown RBP5.03□□□□□ -1.6
SNX25-206ENST00000513433 CXCL16Q9H2A7 254 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 CWH43Q9H720 699 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 GAR1Q9NY12 217 aaKnown RBP5.03□□□□□ -1.6
SNX25-206ENST00000513433 ASIC5Q9NY37 505 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 UBQLN1Q9UMX0 589 aaKnown RBP5.03□□□□□ -1.6
SNX25-206ENST00000513433 MAST4O15021 2626 aa5.03□□□□□ -1.6
SNX25-206ENST00000513433 PTPRZ1P23471 2315 aaPredicted RBP5.02□□□□□ -1.61
SNX25-206ENST00000513433 PTPRJQ12913 1337 aa5.02□□□□□ -1.61
SNX25-206ENST00000513433 LY6G6EA0A0G2JKS1 128 aa5.02□□□□□ -1.61
SNX25-206ENST00000513433 MED19A0JLT2 244 aaPredicted RBP5.02□□□□□ -1.61
SNX25-206ENST00000513433 LRRIQ3A6PVS8 624 aaPredicted RBP5.02□□□□□ -1.61
SNX25-206ENST00000513433 LACTBL1A8MY62 500 aa5.02□□□□□ -1.61
SNX25-206ENST00000513433 DDHD2O94830 711 aa5.02□□□□□ -1.61
SNX25-206ENST00000513433 FGFR1OPO95684 399 aaKnown RBP5.02□□□□□ -1.61
SNX25-206ENST00000513433 RB1P06400 928 aa5.02□□□□□ -1.61
SNX25-206ENST00000513433 GALTP07902 379 aa5.02□□□□□ -1.61
SNX25-206ENST00000513433 TMEM191BP0C7N4 346 aa5.02□□□□□ -1.61
SNX25-206ENST00000513433 KRT13P13646 458 aa5.02□□□□□ -1.61
SNX25-206ENST00000513433 MYOGP15173 224 aa5.02□□□□□ -1.61
SNX25-206ENST00000513433 PAX3P23760 479 aa5.02□□□□□ -1.61
SNX25-206ENST00000513433 CCKBRP32239 447 aa5.02□□□□□ -1.61
SNX25-206ENST00000513433 RPL9P32969 192 aaKnown RBP5.02□□□□□ -1.61
SNX25-206ENST00000513433 CTNNB1P35222 781 aa5.02□□□□□ -1.61
SNX25-206ENST00000513433 ARHGAP25P42331 645 aa5.02□□□□□ -1.61
SNX25-206ENST00000513433 SLC11A1P49279 550 aa5.02□□□□□ -1.61
SNX25-206ENST00000513433 ALDH7A1P49419 539 aaKnown RBP5.02□□□□□ -1.61
SNX25-206ENST00000513433 RENBPP51606 427 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms