RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 LONP2Q86WA8 852 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 SETD9Q8NE22 299 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ACMSDQ8TDX5 336 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 TRPC4APQ8TEL6 797 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 MAGEB18Q96M61 343 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 C17orf62Q9BQA9 187 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 NDC1Q9BTX1 674 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CCDC177Q9NQR7 707 aaPredicted RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 GDF3Q9NR23 364 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 FNIP2Q9P278 1114 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 SERTAD3Q9UJW9 196 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.25□□□□□ -1.73
VCAN-209ENST00000513016 TMEM191CA6NGB0 347 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CILPO75339 1184 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ZNF217O75362 1048 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 MATN4O95460 622 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CCKBRP32239 447 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 FEN1P39748 380 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 ASMTP46597 345 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 NOMO3P69849 1222 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ELOCQ15369 112 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 DLG2Q15700 870 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 UGCGQ16739 394 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 N4BP2L1Q5TBK1 243 aaPredicted RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 OR52K1Q8NGK4 314 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 TMEM125Q96AQ2 219 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 RNFT2Q96EX2 444 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 KLHL32Q96NJ5 620 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 OLFM1Q99784 485 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 SLC25A23Q9BV35 468 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ADAM33Q9BZ11 813 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 TMEM27Q9HBJ8 222 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 STXBP5LQ9Y2K9 1186 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 SMIM31A0A1B0GVY4 71 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 INSIG1O15503 277 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 PFDN1O60925 122 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 TMCC2O75069 709 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 RPSAP08865 295 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 HGFP14210 728 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 KCNA5P22460 613 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ACTR1BP42025 376 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 MLLT3P42568 568 aaPredicted RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 ACTR1AP61163 376 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 MAMLD1Q13495 774 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 C9orf64Q5T6V5 341 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 FAM171BQ6P995 826 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 GDPD4Q6W3E5 623 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 GPRIN3Q6ZVF9 776 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 SLC26A9Q7LBE3 791 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CYP2U1Q7Z449 544 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 SVOPQ8N4V2 548 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 OXR1Q8N573 874 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 EPS8L1Q8TE68 723 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 NUS1Q96E22 293 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 RBM18Q96H35 190 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 CNBD2Q96M20 576 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 TCF12Q99081 682 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 P2RY13Q9BPV8 354 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 BRINP2Q9C0B6 783 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 FZD8Q9H461 694 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ANKHQ9HCJ1 492 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 C8GP07360 202 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ETS1P14921 441 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ZNF23P17027 643 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 DMWDQ09019 674 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 DYNC1I2Q13409 638 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 FRG1Q14331 258 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 DUPD1Q68J44 220 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 BBS12Q6ZW61 710 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ZBTB2Q8N680 514 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 LMX1AQ8TE12 382 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 DCAKDQ8WVC6 231 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CERS2Q96G23 380 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 SLC38A2Q96QD8 506 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 TEFMQ96QE5 360 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 CCM2Q9BSQ5 444 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 SMURF2Q9HAU4 748 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 WDR6Q9NNW5 1121 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 FBXO5Q9UKT4 447 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 INVSQ9Y283 1065 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 EFR3BQ9Y2G0 817 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 AK5Q9Y6K8 562 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 C3P01024 1663 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 MRC1P22897 1456 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 TRBV23OR9-2A0A075B6M9 112 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 H0YGN5 161 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 DDX3XO00571 662 aaKnown RBP eCLIP4.25□□□□□ -1.73
VCAN-209ENST00000513016 WNT9AO14904 365 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 B3GALT2O43825 422 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 TCN1P20061 433 aaPredicted RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 ME2P23368 584 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 IL12BP29460 328 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 SLC1A6P48664 564 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 RAD23BP54727 409 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 FASTKQ14296 549 aaKnown RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 GALNT3Q14435 633 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CYTH1Q15438 398 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ADRM1Q16186 407 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 RNF44Q7L0R7 432 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms