RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 COMPP49747 757 aaPredicted RBP5.4□□□□□ -1.54
CHD1-209ENST00000512844 PDLIM4P50479 330 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 RPL36AP83881 106 aaKnown RBP5.4□□□□□ -1.54
CHD1-209ENST00000512844 FGFBP1Q14512 234 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 COL28A1Q2UY09 1125 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 KLHL22Q53GT1 634 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 C9orf57Q5W0N0 161 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 MTSS1LQ765P7 747 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 C16orf82Q7Z2V1 217 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 NEXN-AS1Q8NBZ9 246 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 LILRB1Q8NHL6 650 aaPredicted RBP5.4□□□□□ -1.54
CHD1-209ENST00000512844 BICD1Q96G01 975 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 TMEM68Q96MH6 324 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 PIP5K1AQ99755 562 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 FAM110AQ9BQ89 295 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 NOX4Q9NPH5 578 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 MKKSQ9NPJ1 570 aaPredicted RBP5.4□□□□□ -1.54
CHD1-209ENST00000512844 SIX4Q9UIU6 781 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 MKLN1Q9UL63 735 aa5.4□□□□□ -1.54
CHD1-209ENST00000512844 CNTNAP2Q9UHC6 1331 aa5.4□□□□□ -1.55
CHD1-209ENST00000512844 KDM3AQ9Y4C1 1321 aa5.4□□□□□ -1.55
CHD1-209ENST00000512844 A0A1W2PQM1 296 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 CPED1A4D0V7 1026 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 HMGB1P1B2RPK0 211 aaPredicted RBP5.39□□□□□ -1.55
CHD1-209ENST00000512844 SLC16A5O15375 505 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 HNRNPCL1O60812 293 aaKnown RBP5.39□□□□□ -1.55
CHD1-209ENST00000512844 MBD4O95243 580 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 CYC1P08574 325 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 ZNF182P17025 639 aaPredicted RBP5.39□□□□□ -1.55
CHD1-209ENST00000512844 BSGP35613 385 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 DDIT3P35638 169 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 IL15P40933 162 aaPredicted RBP5.39□□□□□ -1.55
CHD1-209ENST00000512844 EIF2S3P41091 472 aaKnown RBP5.39□□□□□ -1.55
CHD1-209ENST00000512844 SEC61BP60468 96 aaKnown RBP5.39□□□□□ -1.55
CHD1-209ENST00000512844 OLR1P78380 273 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 DLG1Q12959 904 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 OLIG2Q13516 323 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 FRG1Q14331 258 aaKnown RBP5.39□□□□□ -1.55
CHD1-209ENST00000512844 EFNB3Q15768 340 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 KRT24Q2M2I5 525 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 FAM69BQ5VUD6 431 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 FAAH2Q6GMR7 532 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 SIGIRRQ6IA17 410 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 RGMBQ6NW40 437 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 PRSS57Q6UWY2 283 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 SFR1Q86XK3 245 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 WDR63Q8IWG1 891 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 DCP1BQ8IZD4 617 aaKnown RBP5.39□□□□□ -1.55
CHD1-209ENST00000512844 SPATA6LQ8N4H0 392 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 NEK9Q8TD19 979 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 UCMAQ8WVF2 138 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 INTS12Q96CB8 462 aaKnown RBP5.39□□□□□ -1.55
CHD1-209ENST00000512844 SCMH1Q96GD3 660 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 SLC41A2Q96JW4 573 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 C7orf26Q96N11 449 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 CSF3RQ99062 836 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 TKTL2Q9H0I9 626 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 ZHX3Q9H4I2 956 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 PPP1R3EQ9H7J1 279 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 ZNF224Q9NZL3 707 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 LIMA1Q9UHB6 759 aaKnown RBP5.39□□□□□ -1.55
CHD1-209ENST00000512844 INTS6Q9UL03 887 aaKnown RBP5.39□□□□□ -1.55
CHD1-209ENST00000512844 CEPT1Q9Y6K0 416 aa5.39□□□□□ -1.55
CHD1-209ENST00000512844 MAGEA13PA6NCF6 341 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 GOLGA6L9A6NEM1 432 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 PLRG1O43660 514 aaKnown RBP5.38□□□□□ -1.55
CHD1-209ENST00000512844 IPO7O95373 1038 aaKnown RBP5.38□□□□□ -1.55
CHD1-209ENST00000512844 CLDN14O95500 239 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 MAOAP21397 527 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 PIP4K2AP48426 406 aaPredicted RBP5.38□□□□□ -1.55
CHD1-209ENST00000512844 CLCNKAP51800 687 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 COASYQ13057 564 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 OASLQ15646 514 aaKnown RBP5.38□□□□□ -1.55
CHD1-209ENST00000512844 TSTQ16762 297 aaKnown RBP5.38□□□□□ -1.55
CHD1-209ENST00000512844 EIF2S3LQ2VIR3 472 aaKnown RBP5.38□□□□□ -1.55
CHD1-209ENST00000512844 DSTYKQ6XUX3 929 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 C18orf65Q6ZTR6 163 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 CACNA2D4Q7Z3S7 1137 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 RBM23Q86U06 439 aaKnown RBP5.38□□□□□ -1.55
CHD1-209ENST00000512844 EXOC3L1Q86VI1 746 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 TICAM2Q86XR7 235 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 CCDC13Q8IYE1 715 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 TEX19Q8NA77 164 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 ZNF114Q8NC26 417 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 LMO3Q8TAP4 145 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 PSPC1Q8WXF1 523 aaKnown RBP5.38□□□□□ -1.55
CHD1-209ENST00000512844 TANKQ92844 425 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 PCGF1Q9BSM1 259 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 HAUS8Q9BT25 410 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 GLIS2Q9BZE0 524 aaPredicted RBP5.38□□□□□ -1.55
CHD1-209ENST00000512844 IL25Q9H293 177 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 SLC28A3Q9HAS3 691 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 DIAPH3Q9NSV4 1193 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 PCDHAC2Q9Y5I4 1007 aa5.38□□□□□ -1.55
CHD1-209ENST00000512844 A0A1W2PRG0 241 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 SMTNL1A8MU46 457 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 KRTAP29-1A8MX34 341 aaPredicted RBP5.37□□□□□ -1.55
CHD1-209ENST00000512844 RFPL2O75678 378 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 TMEM63AO94886 807 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms