RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 PCDHGA7Q9Y5G6 932 aa14.73□□□□□ -0.05
CCHCR1-229ENST00000512418 HELZ2Q9BYK8 2649 aaKnown RBP14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 TTC24A2A3L6 582 aaPredicted RBP14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 B4DGG1 531 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 K7ENP7 123 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 NUDT21O43809 227 aaKnown RBP14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 NOBOXO60393 691 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 HEXIM1O94992 359 aaKnown RBP14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 RARAP10276 462 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 VIPR1P32241 457 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 UGT1A5P35504 534 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 CDH6P55285 790 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 CFHR1Q03591 330 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 CLN3Q13286 438 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 HLTFQ14527 1009 aaKnown RBP eCLIP14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 NR1I3Q14994 352 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 TDRD12Q587J7 1177 aaKnown RBP14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 RALGPS1Q5JS13 557 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 SPECC1LQ69YQ0 1117 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 INO80CQ6PI98 192 aaPredicted RBP14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 HEATR4Q86WZ0 1026 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 PELI3Q8N2H9 469 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 PGBD5Q8N414 524 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 ZNF843Q8N446 348 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 NIPA2Q8N8Q9 360 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 KIAA1524Q8TCG1 905 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 DTD2Q96FN9 168 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 NOD2Q9HC29 1040 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 PHPT1Q9NRX4 125 aaPredicted RBP14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 MOSPD1Q9UJG1 213 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 PHTF1Q9UMS5 762 aa14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 BZW2Q9Y6E2 419 aaKnown RBP14.72□□□□□ -0.05
CCHCR1-229ENST00000512418 CFAP46Q8IYW2 2715 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 PSMD11O00231 422 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 JMJD7P0C870 316 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 CYP2A6P11509 494 aaPredicted RBP14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 LHCGRP22888 699 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 MMP13P45452 471 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 MAXP61244 160 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 SLC25A11Q02978 314 aaKnown RBP14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 TRAF2Q12933 501 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 ARHGEF7Q14155 803 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 MARC1Q5VT66 337 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 HGSNATQ68CP4 663 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 CAVIN1Q6NZI2 390 aaKnown RBP14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 CCDC81Q6ZN84 652 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 USP45Q70EL2 814 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 SPRED1Q7Z699 444 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 Q8N9G6 341 aaPredicted RBP14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 CCL4L1Q8NHW4 92 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 SYN2Q92777 582 aaPredicted RBP14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 TMEM159Q96B96 161 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 TEX101Q9BY14 249 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 THAP2Q9H0W7 228 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 CARS2Q9HA77 564 aaKnown RBP14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 PCDH18Q9HCL0 1135 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 RCOR3Q9P2K3 495 aaPredicted RBP14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 LRIT1Q9P2V4 623 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 ANAPC7Q9UJX3 599 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 ACSL6Q9UKU0 697 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 RNF215Q9Y6U7 377 aa14.71□□□□□ -0.05
CCHCR1-229ENST00000512418 A0A1W2PQJ5 194 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 NPIPB15A6NHN6 443 aaPredicted RBP14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 PGLSO95336 258 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 CCNB1P14635 433 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 TEAD1P28347 426 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 SLC5A2P31639 672 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 ETV3P41162 512 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 CDK3Q00526 305 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 ZFP36L1Q07352 338 aaKnown RBP14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 ILF3Q12906 894 aaKnown RBP eCLIP14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 KRT81Q14533 505 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 IQCB1Q15051 598 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 ZSCAN23Q3MJ62 389 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 ARMC12Q5T9G4 340 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 DENND2CQ68D51 928 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 TXNRD3NBQ6F5E7 133 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 ZNF605Q86T29 641 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 JAMLQ86YT9 394 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 LRRC49Q8IUZ0 686 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 SFTPA2Q8IWL1 248 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 CBARPQ8N350 705 aaPredicted RBP14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 GPBAR1Q8TDU6 330 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 TTC9Q92623 222 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 SCRN2Q96FV2 425 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 MCCC1Q96RQ3 725 aaPredicted RBP14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 CCNL2Q96S94 520 aaPredicted RBP14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 GSDMCQ9BYG8 508 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 FRMD8Q9BZ67 464 aaPredicted RBP14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 TRNAU1APQ9NX07 287 aaKnown RBP14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 PISDQ9UG56 409 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 IP6K2Q9UHH9 426 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 ATXN7L1Q9ULK2 861 aaPredicted RBP14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 LOXL2Q9Y4K0 774 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 UNC13CQ8NB66 2214 aa14.7□□□□□ -0.06
CCHCR1-229ENST00000512418 ARHGEF17Q96PE2 2063 aaPredicted RBP14.69□□□□□ -0.06
CCHCR1-229ENST00000512418 SERPING1P05155 500 aa14.69□□□□□ -0.06
CCHCR1-229ENST00000512418 CEACAM5P06731 702 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms