RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 PEX5P50542 639 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 HK3P52790 923 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 EPHB1P54762 984 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 SKOR1P84550 965 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 ARHGEF7Q14155 803 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 PDK1Q15118 436 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 TAZQ16635 292 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 HES3Q5TGS1 186 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 LRRC66Q68CR7 880 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 ESRP1Q6NXG1 681 aaKnown RBP16.5■□□□□ 0.23
DDX41-213ENST00000512027 USP45Q70EL2 814 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 CCDC50Q8IVM0 306 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 KATNAL2Q8IYT4 538 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 BTN2A2Q8WVV5 523 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 ZCCHC14Q8WYQ9 949 aaKnown RBP16.5■□□□□ 0.23
DDX41-213ENST00000512027 OR1E3Q8WZA6 343 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 DTD2Q96FN9 168 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 WDR92Q96MX6 357 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 AGAP3Q96P47 875 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 RBM15Q96T37 977 aaKnown RBP eCLIP16.5■□□□□ 0.23
DDX41-213ENST00000512027 BAG1Q99933 345 aaPredicted RBP16.5■□□□□ 0.23
DDX41-213ENST00000512027 HERPUD2Q9BSE4 406 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 DESI2Q9BSY9 194 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 ANP32EQ9BTT0 268 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 BRD8Q9H0E9 1235 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 SUDS3Q9H7L9 328 aaPredicted RBP16.5■□□□□ 0.23
DDX41-213ENST00000512027 PCDH9Q9HC56 1237 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 LUC7LQ9NQ29 371 aaKnown RBP16.5■□□□□ 0.23
DDX41-213ENST00000512027 GOLGA6AQ9NYA3 693 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 TRIM10Q9UDY6 481 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 AMACRQ9UHK6 382 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 ZMIZ1Q9ULJ6 1067 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 PPIL1Q9Y3C6 166 aa16.5■□□□□ 0.23
DDX41-213ENST00000512027 ASXL3Q9C0F0 2248 aa16.49■□□□□ 0.23
DDX41-213ENST00000512027 ANKRD11Q6UB99 2663 aaPredicted RBP16.49■□□□□ 0.23
DDX41-213ENST00000512027 hCG_1818297A0A087WSY0 165 aa16.49■□□□□ 0.23
DDX41-213ENST00000512027 PPP1R12AO14974 1030 aaPredicted RBP16.49■□□□□ 0.23
DDX41-213ENST00000512027 CASC3O15234 703 aaKnown RBP16.49■□□□□ 0.23
DDX41-213ENST00000512027 C1SP09871 688 aa16.49■□□□□ 0.23
DDX41-213ENST00000512027 CKMT1AP12532 417 aa16.49■□□□□ 0.23
DDX41-213ENST00000512027 ZFXP17010 805 aaPredicted RBP16.49■□□□□ 0.23
DDX41-213ENST00000512027 HTR1BP28222 390 aa16.49■□□□□ 0.23
DDX41-213ENST00000512027 NAP1L1P55209 391 aaKnown RBP16.49■□□□□ 0.23
DDX41-213ENST00000512027 SRP54P61011 504 aaKnown RBP16.49■□□□□ 0.23
DDX41-213ENST00000512027 CDKN3Q16667 212 aa16.49■□□□□ 0.23
DDX41-213ENST00000512027 PNCKQ6P2M8 343 aa16.49■□□□□ 0.23
DDX41-213ENST00000512027 KDELC2Q7Z4H8 507 aa16.49■□□□□ 0.23
DDX41-213ENST00000512027 CBARPQ8N350 705 aaPredicted RBP16.49■□□□□ 0.23
DDX41-213ENST00000512027 GALNT15Q8N3T1 639 aa16.49■□□□□ 0.23
DDX41-213ENST00000512027 MDM1Q8TC05 714 aa16.49■□□□□ 0.23
DDX41-213ENST00000512027 PTCD2Q8WV60 388 aaKnown RBP16.49■□□□□ 0.23
DDX41-213ENST00000512027 HEMGNQ9BXL5 484 aa16.49■□□□□ 0.23
DDX41-213ENST00000512027 WDR26Q9H7D7 661 aa16.49■□□□□ 0.23
DDX41-213ENST00000512027 CSNK1G3Q9Y6M4 447 aa16.49■□□□□ 0.23
DDX41-213ENST00000512027 DSPP15924 2871 aaKnown RBP16.48■□□□□ 0.23
DDX41-213ENST00000512027 CAPN8A6NHC0 703 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 F5H423 210 aaPredicted RBP16.48■□□□□ 0.23
DDX41-213ENST00000512027 CACNB4O00305 520 aaPredicted RBP16.48■□□□□ 0.23
DDX41-213ENST00000512027 YY2O15391 372 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 KRT37O76014 449 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 RASGRP1O95267 797 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 IPO7O95373 1038 aaKnown RBP16.48■□□□□ 0.23
DDX41-213ENST00000512027 CLDN7O95471 211 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 CDC25BP30305 580 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 TRIM23P36406 574 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 VAV2P52735 878 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 KIAA1024LP59773 190 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 INSM1Q01101 510 aaPredicted RBP16.48■□□□□ 0.23
DDX41-213ENST00000512027 CAMK2BQ13554 666 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 GALNT3Q14435 633 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 PRKD1Q15139 912 aaPredicted RBP16.48■□□□□ 0.23
DDX41-213ENST00000512027 TFDP3Q5H9I0 405 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 ZCCHC8Q6NZY4 707 aaKnown RBP16.48■□□□□ 0.23
DDX41-213ENST00000512027 GUSBP11Q6P575 273 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 TECPR1Q7Z6L1 1165 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 ZC3H18Q86VM9 953 aaKnown RBP16.48■□□□□ 0.23
DDX41-213ENST00000512027 HEATR4Q86WZ0 1026 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 SLC35F3Q8IY50 421 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 SPATA22Q8NHS9 363 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 SCAMP4Q969E2 229 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 DUSP23Q9BVJ7 150 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 SIRPGQ9P1W8 387 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 MOSPD1Q9UJG1 213 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 RP1P56715 2156 aa16.48■□□□□ 0.23
DDX41-213ENST00000512027 CPED1A4D0V7 1026 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 LMO7DNF2Z398 122 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 PSMD11O00231 422 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 ZRANB2O95218 330 aaKnown RBP eCLIP16.47■□□□□ 0.23
DDX41-213ENST00000512027 CAPNS1P04632 268 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 ANXA6P08133 673 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 CTSEP14091 401 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 JUPP14923 745 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 CES1P23141 567 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 PTPN3P26045 913 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 PTSQ03393 145 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 TARDBPQ13148 414 aaKnown RBP eCLIP16.47■□□□□ 0.23
DDX41-213ENST00000512027 TFDP2Q14188 446 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 PCSK7Q16549 785 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 QPCTQ16769 361 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 RAET1GQ6H3X3 334 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms