RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 C2P06681 752 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 C8BP07358 591 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 C7P10643 843 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 ZNF23P17027 643 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 FSHRP23945 695 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 PSMB4P28070 264 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 PCSK1P29120 753 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 TKTL1P51854 596 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 DNAJB13P59910 316 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 SCAPQ12770 1279 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 SLC9B1Q4ZJI4 515 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 FBXL19Q6PCT2 694 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 PID1Q7Z2X4 250 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 ERI1Q8IV48 349 aaKnown RBP12.9□□□□□ -0.34
HMGB2-205ENST00000511316 NUP93Q8N1F7 819 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 OR6B3Q8NGW1 331 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 PSMG2Q969U7 264 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 PIWIL1Q96J94 861 aaKnown RBP12.9□□□□□ -0.34
HMGB2-205ENST00000511316 ZSWIM3Q96MP5 696 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 GATA5Q9BWX5 397 aaPredicted RBP12.9□□□□□ -0.34
HMGB2-205ENST00000511316 B3GNT5Q9BYG0 378 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 TRIM15Q9C019 465 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 RBM38Q9H0Z9 239 aaKnown RBP12.9□□□□□ -0.34
HMGB2-205ENST00000511316 GBA3Q9H227 469 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 SMOC2Q9H3U7 446 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 VPS45Q9NRW7 570 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 PNPLA3Q9NST1 481 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 PCDHB5Q9Y5E4 795 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 TECTAO75443 2155 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 A0A087X1B8 175 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 VILLO15195 856 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 LRG1P02750 347 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 ASGR2P07307 311 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 ERVK-10P10266 1014 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 GOT1P17174 413 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 TFEBP19484 476 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 GRIA1P42261 906 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 GRIA2P42262 883 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 TUFMP49411 452 aaKnown RBP12.9□□□□□ -0.34
HMGB2-205ENST00000511316 CSRP3P50461 194 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 NUP107P57740 925 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 PPIDQ08752 370 aaKnown RBP12.9□□□□□ -0.34
HMGB2-205ENST00000511316 GALNT1Q10472 559 aaPredicted RBP12.9□□□□□ -0.34
HMGB2-205ENST00000511316 CDH17Q12864 832 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 NFE2Q16621 373 aaPredicted RBP12.9□□□□□ -0.34
HMGB2-205ENST00000511316 DDR2Q16832 855 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 NADK2Q4G0N4 442 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 SDHAF4Q5VUM1 108 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 KLHDC10Q6PID8 442 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 OTOP3Q7RTS5 596 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 ACOT1Q86TX2 421 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 KCNMB4Q86W47 210 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 NPAS3Q8IXF0 933 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 ZNF567Q8N184 647 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 DNAAF3Q8N9W5 541 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 B3GALNT2Q8NCR0 500 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 CCNYQ8ND76 341 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 ST13P5Q8NFI4 369 aaPredicted RBP12.9□□□□□ -0.34
HMGB2-205ENST00000511316 TNIP2Q8NFZ5 429 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 STYXQ8WUJ0 223 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 NT5C3BQ969T7 300 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 FUBP3Q96I24 572 aaKnown RBP eCLIP12.9□□□□□ -0.341e-10■■■□□ 16.2
HMGB2-205ENST00000511316 VPS39Q96JC1 886 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 MAELQ96JY0 434 aaKnown RBP12.9□□□□□ -0.34
HMGB2-205ENST00000511316 CORO1BQ9BR76 489 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 MCMBPQ9BTE3 642 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 SLC2A11Q9BYW1 496 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 KCNK12Q9HB15 430 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 TBCCD1Q9NVR7 557 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 ABI2Q9NYB9 513 aaPredicted RBP12.9□□□□□ -0.34
HMGB2-205ENST00000511316 CLIC5Q9NZA1 410 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.9□□□□□ -0.34
HMGB2-205ENST00000511316 SARDHQ9UL12 918 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 CDH7Q9ULB5 785 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 PSAT1Q9Y617 370 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 ZCWPW2A0A1B0GU75 182 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 CCDC160A6NGH7 325 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 EEF2KO00418 725 aaKnown RBP12.89□□□□□ -0.35
HMGB2-205ENST00000511316 MFSD11O43934 449 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 FAM200BP0CF97 657 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 GJA1P17302 382 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 SULT1E1P49888 294 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 ATP4BP51164 291 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 THOP1P52888 689 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 ESRRGP62508 458 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 HPCAP84074 193 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 TSPY1Q01534 308 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 SULT2A1Q06520 285 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 USP4Q13107 963 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 TRIM25Q14258 630 aaKnown RBP12.89□□□□□ -0.35
HMGB2-205ENST00000511316 PTK2BQ14289 1009 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 SQLEQ14534 574 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 LSM12Q3MHD2 195 aaKnown RBP12.89□□□□□ -0.35
HMGB2-205ENST00000511316 ARL13BQ3SXY8 428 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 MGAT5BQ3V5L5 792 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 PRMT9Q6P2P2 845 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 BNIPLQ7Z465 357 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 C12orf29Q8N999 325 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 HIPK4Q8NE63 616 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 BHLHE22Q8NFJ8 381 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms