RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 PTPRRQ15256 657 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 CRTC1Q6UUV9 634 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 HSD11B1LQ7Z5J1 315 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 TSPAN33Q86UF1 283 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 CBARPQ8N350 705 aaPredicted RBP22.99■■□□□ 1.27
SNF8-209ENST00000510558 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.99■■□□□ 1.27
SNF8-209ENST00000510558 HNRNPLLQ8WVV9 542 aaKnown RBP22.99■■□□□ 1.27
SNF8-209ENST00000510558 DTD2Q96FN9 168 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 RBM15Q96T37 977 aaKnown RBP eCLIP22.99■■□□□ 1.271e-7■■■□□ 16.3
SNF8-209ENST00000510558 LGR4Q9BXB1 951 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 MRPL40Q9NQ50 206 aaKnown RBP22.99■■□□□ 1.27
SNF8-209ENST00000510558 HAUS2Q9NVX0 235 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 DTLQ9NZJ0 730 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 SIRPGQ9P1W8 387 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 GULP1Q9UBP9 304 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 AMACRQ9UHK6 382 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 PADI4Q9UM07 663 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 PPIL1Q9Y3C6 166 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 TTLL3Q9Y4R7 772 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 ZFYVE26Q68DK2 2539 aa22.98■■□□□ 1.27
SNF8-209ENST00000510558 A0A087WV48 116 aa22.98■■□□□ 1.27
SNF8-209ENST00000510558 TNFRSF10CO14798 259 aa22.98■■□□□ 1.27
SNF8-209ENST00000510558 BRINP1O60477 761 aa22.98■■□□□ 1.27
SNF8-209ENST00000510558 CCNB1P14635 433 aa22.98■■□□□ 1.27
SNF8-209ENST00000510558 ETV3P41162 512 aa22.98■■□□□ 1.27
SNF8-209ENST00000510558 COL28A1Q2UY09 1125 aa22.98■■□□□ 1.27
SNF8-209ENST00000510558 ARL10Q8N8L6 244 aa22.98■■□□□ 1.27
SNF8-209ENST00000510558 KYQ8NBH2 561 aa22.98■■□□□ 1.27
SNF8-209ENST00000510558 TPCN2Q8NHX9 752 aa22.98■■□□□ 1.27
SNF8-209ENST00000510558 HDAC11Q96DB2 347 aa22.98■■□□□ 1.27
SNF8-209ENST00000510558 GPR34Q9UPC5 381 aa22.98■■□□□ 1.27
SNF8-209ENST00000510558 ZNF487B1APH4 448 aa22.97■■□□□ 1.27
SNF8-209ENST00000510558 PDE2AO00408 941 aaPredicted RBP22.97■■□□□ 1.27
SNF8-209ENST00000510558 TLX3O43711 291 aaPredicted RBP22.97■■□□□ 1.27
SNF8-209ENST00000510558 HLA-DQB2P05538 268 aa22.97■■□□□ 1.27
SNF8-209ENST00000510558 CES1P23141 567 aa22.97■■□□□ 1.27
SNF8-209ENST00000510558 IHHQ14623 411 aa22.97■■□□□ 1.27
SNF8-209ENST00000510558 SARM1Q6SZW1 724 aa22.97■■□□□ 1.27
SNF8-209ENST00000510558 Q6ZVL8 140 aa22.97■■□□□ 1.27
SNF8-209ENST00000510558 CCDC13Q8IYE1 715 aa22.97■■□□□ 1.27
SNF8-209ENST00000510558 NDUFAF2Q8N183 169 aa22.97■■□□□ 1.27
SNF8-209ENST00000510558 PLD5Q8N7P1 536 aa22.97■■□□□ 1.27
SNF8-209ENST00000510558 CCNYQ8ND76 341 aa22.97■■□□□ 1.27
SNF8-209ENST00000510558 ZNF830Q96NB3 372 aaPredicted RBP22.97■■□□□ 1.27
SNF8-209ENST00000510558 DCBLD2Q96PD2 775 aa22.97■■□□□ 1.27
SNF8-209ENST00000510558 PHPT1Q9NRX4 125 aaPredicted RBP22.97■■□□□ 1.27
SNF8-209ENST00000510558 INTUQ9ULD6 942 aa22.97■■□□□ 1.27
SNF8-209ENST00000510558 ARHGEF17Q96PE2 2063 aaPredicted RBP22.96■■□□□ 1.27
SNF8-209ENST00000510558 CELSR3Q9NYQ7 3312 aa22.96■■□□□ 1.27
SNF8-209ENST00000510558 C3orf70A6NLC5 250 aaPredicted RBP22.96■■□□□ 1.27
SNF8-209ENST00000510558 MYCLP1P12525 358 aaPredicted RBP22.96■■□□□ 1.27
SNF8-209ENST00000510558 KRT10P13645 584 aa22.96■■□□□ 1.27
SNF8-209ENST00000510558 EPHB1P54762 984 aa22.96■■□□□ 1.27
SNF8-209ENST00000510558 ISXQ2M1V0 245 aa22.96■■□□□ 1.27
SNF8-209ENST00000510558 HEATR4Q86WZ0 1026 aa22.96■■□□□ 1.27
SNF8-209ENST00000510558 VSIG1Q86XK7 387 aa22.96■■□□□ 1.27
SNF8-209ENST00000510558 ARRDC2Q8TBH0 407 aa22.96■■□□□ 1.27
SNF8-209ENST00000510558 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.96■■□□□ 1.27
SNF8-209ENST00000510558 SMIM14Q96QK8 99 aa22.96■■□□□ 1.27
SNF8-209ENST00000510558 CCDC3Q9BQI4 270 aa22.96■■□□□ 1.27
SNF8-209ENST00000510558 TDRD1Q9BXT4 1180 aaKnown RBP22.96■■□□□ 1.27
SNF8-209ENST00000510558 TRIM5Q9C035 493 aa22.96■■□□□ 1.27
SNF8-209ENST00000510558 CYP4F12Q9HCS2 524 aa22.96■■□□□ 1.27
SNF8-209ENST00000510558 MOSPD1Q9UJG1 213 aa22.96■■□□□ 1.27
SNF8-209ENST00000510558 CHKBQ9Y259 395 aa22.96■■□□□ 1.27
SNF8-209ENST00000510558 A0A0J9YYE9 177 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 A0A0U1RQS6 177 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 PRSS38A1L453 326 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 GOLGA6CA6NDK9 693 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 GOLGA6BA6NDN3 693 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 USP12O75317 370 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 TRBC1P01850 177 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 KRT1P04264 644 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 GOLGA6DP0CG33 693 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 CA4P22748 312 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 PPIDQ08752 370 aaKnown RBP22.95■■□□□ 1.26
SNF8-209ENST00000510558 NIPAL4Q0D2K0 466 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 LRRC38Q5VT99 294 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 LRRC66Q68CR7 880 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 RAET1GQ6H3X3 334 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 RBM44Q6ZP01 1051 aaKnown RBP22.95■■□□□ 1.26
SNF8-209ENST00000510558 TECPR1Q7Z6L1 1165 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 TAF8Q7Z7C8 310 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 SNIP1Q8TAD8 396 aaKnown RBP22.95■■□□□ 1.26
SNF8-209ENST00000510558 LGMNQ99538 433 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 TEX101Q9BY14 249 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 TMEM168Q9H0V1 697 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 GOLGA6AQ9NYA3 693 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 HEY1Q9Y5J3 304 aa22.95■■□□□ 1.26
SNF8-209ENST00000510558 APOL1O14791 398 aa22.94■■□□□ 1.26
SNF8-209ENST00000510558 CASC3O15234 703 aaKnown RBP22.94■■□□□ 1.26
SNF8-209ENST00000510558 TCEA3O75764 348 aa22.94■■□□□ 1.26
SNF8-209ENST00000510558 MPOP05164 745 aa22.94■■□□□ 1.26
SNF8-209ENST00000510558 EIF2S3P41091 472 aaKnown RBP22.94■■□□□ 1.26
SNF8-209ENST00000510558 SLC1A1P43005 524 aa22.94■■□□□ 1.26
SNF8-209ENST00000510558 CDK3Q00526 305 aa22.94■■□□□ 1.26
SNF8-209ENST00000510558 TCEAL1Q15170 157 aa22.94■■□□□ 1.26
SNF8-209ENST00000510558 TBC1D25Q3MII6 688 aa22.94■■□□□ 1.26
SNF8-209ENST00000510558 SLC9A4Q6AI14 798 aa22.94■■□□□ 1.26
SNF8-209ENST00000510558 WDR48Q8TAF3 677 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms