RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PLXNB3Q9ULL4 1909 aa8.78□□□□□ -1
PDLIM5-213ENST00000509357 EPG5Q9HCE0 2579 aa8.77□□□□□ -1
PDLIM5-213ENST00000509357 FAM149AA5PLN7 773 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 TMEM8BA6NDV4 472 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 TRIM38O00635 465 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 RIOK3O14730 519 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 LIASO43766 372 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 CEP104O60308 925 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 PIAS2O75928 621 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 FGGP02679 453 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 PCCBP05166 539 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 C1SP09871 688 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 ELFN1P0C7U0 828 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 ZSCAN5DPP0CG00 497 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 RBP3P10745 1247 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 CDK4P11802 303 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 C6P13671 934 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 ZFXP17010 805 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 NFKB1P19838 968 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 HTR1BP28222 390 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 HNF1BP35680 557 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 HSPA9P38646 679 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 KCNJ1P48048 391 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 LIG3P49916 1009 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 EIF3EP60228 445 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 GNG11P61952 73 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 YPEL5P62699 121 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 FZD2Q14332 565 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 ACOX1Q15067 660 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 PDK1Q15118 436 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 TEX44Q53QW1 395 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 PAPD7Q5XG87 772 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 DENND2CQ68D51 928 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 KDELC1Q6UW63 502 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 CCNI2Q6ZMN8 369 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 RFLNAQ6ZTI6 216 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 TMPRSS7Q7RTY8 843 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 RD3Q7Z3Z2 195 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 CREG2Q8IUH2 290 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 LRRC49Q8IUZ0 686 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 KLHDC8BQ8IXV7 354 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 PELI3Q8N2H9 469 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 SLC25A45Q8N413 288 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 CCNYQ8ND76 341 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 CCDC110Q8TBZ0 833 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 TFB1MQ8WVM0 346 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 BTN2A2Q8WVV5 523 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 P3H4Q92791 437 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 GATA6Q92908 595 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 CENPTQ96BT3 561 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 IFT43Q96FT9 208 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 TEKT5Q96M29 485 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 AGAP3Q96P47 875 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 NUDCD1Q96RS6 583 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 TRIB3Q96RU7 358 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 RBM15Q96T37 977 aaKnown RBP eCLIP8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 KLF6Q99612 283 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 SEMA3CQ99985 751 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 TMEM121Q9BTD3 319 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 MAK16Q9BXY0 300 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 SLC13A1Q9BZW2 595 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 MBNL1Q9NR56 388 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 HAUS2Q9NVX0 235 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 SEPT10Q9P0V9 454 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 ZMIZ1Q9ULJ6 1067 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 DOLKQ9UPQ8 538 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 ZKSCAN5Q9Y2L8 839 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 NEU2Q9Y3R4 380 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 PCDHGA1Q9Y5H4 931 aa8.77□□□□□ -1.01
PDLIM5-213ENST00000509357 A0A1W2PQ67 120 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 FAM221BA6H8Z2 402 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 H7C0C1 242 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 SCAMP1O15126 338 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 AQP9O43315 295 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 NRDCO43847 1150 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 TJP3O95049 919 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 METTL18O95568 372 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 CPP00450 1065 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 CSF2P04141 144 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 CTSEP14091 401 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 NME1P15531 152 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 MX2P20592 715 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 LHCGRP22888 699 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 IGFALSP35858 605 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 MMP12P39900 470 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 CD86P42081 329 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 ATP5OP48047 213 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 DUSP3P51452 185 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 PFN3P60673 137 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 PPARDQ03181 441 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 MSLNQ13421 630 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 XRCC4Q13426 336 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 SNX1Q13596 522 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 INPP5AQ14642 412 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 IRF4Q15306 451 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 CDKN3Q16667 212 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 PRRT3Q5FWE3 981 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 TIGD7Q6NT04 549 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 ENPP7Q6UWV6 458 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 TMPRSS12Q86WS5 348 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms