RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 CEP70Q8NHQ1 597 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 RIN3Q8TB24 985 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 MAPK15Q8TD08 544 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 DDI1Q8WTU0 396 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 PRICKLE1Q96MT3 831 aaPredicted RBP11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 CDRT15Q96T59 188 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 YME1L1Q96TA2 773 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 CAB39LQ9H9S4 337 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 ZBTB26Q9HCK0 441 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 MAN1C1Q9NR34 630 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 NCKIPSDQ9NZQ3 722 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 MYLKQ15746 1914 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 TARM1B6A8C7 271 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 ACSL4O60488 711 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 STMN1P16949 149 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 MPSTP25325 297 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 CORO1AP31146 461 aaKnown RBP11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 ERFP50548 548 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 GEMP55040 296 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 WNT3AP56704 352 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 RAB10P61026 200 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 DSC2Q02487 901 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 DLG1Q12959 904 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 STX5Q13190 355 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 PARP15Q460N3 678 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 TPGS2Q68CL5 300 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 LRRC8EQ6NSJ5 796 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 RANBP10Q6VN20 620 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 AHI1Q8N157 1196 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 PGBD5Q8N414 524 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 HIPK4Q8NE63 616 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 PPHLN1Q8NEY8 458 aaKnown RBP11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 NAT14Q8WUY8 206 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 WBP2Q969T9 261 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 IMP4Q96G21 291 aaKnown RBP11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 DCUN1D1Q96GG9 259 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 MYRFLQ96LU7 910 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 CEP295NLQ96MC4 621 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 CDK5RAP1Q96SZ6 601 aaKnown RBP11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 MRPL57Q9BQC6 102 aaKnown RBP11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 HERC2P3Q9BVR0 1158 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 PRKD2Q9BZL6 878 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 SPG21Q9NZD8 308 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 TRPM5Q9NZQ8 1165 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 PADI4Q9UM07 663 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 ACTL7AQ9Y615 435 aa11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 ZFP37Q9Y6Q3 630 aaPredicted RBP11.05□□□□□ -0.64
SH3RF1-203ENST00000508685 TXNDC9O14530 226 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 TEX28O15482 410 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 STC2O76061 302 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 CSPG5O95196 566 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 TNFAIP8O95379 198 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 MMP2P08253 660 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 LAG3P18627 525 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 CA8P35219 290 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 PSMD8P48556 350 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 NAGLUP54802 743 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 LSAMPQ13449 338 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 DLG2Q15700 870 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 PDCD2Q16342 344 aaPredicted RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 KDELC1Q6UW63 502 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 TMEM150AQ86TG1 271 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 DDX53Q86TM3 631 aaKnown RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 CMTR2Q8IYT2 770 aaKnown RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 FSTL5Q8N475 847 aaPredicted RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 ACVR1CQ8NER5 493 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 OVCA2Q8WZ82 227 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 MAELQ96JY0 434 aaKnown RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 SLC22A12Q96S37 553 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 CYP2S1Q96SQ9 504 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 MRPL1Q9BYD6 325 aaKnown RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 MRPS26Q9BYN8 205 aaKnown RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 SLC25A51Q9H1U9 297 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 MRPL46Q9H2W6 279 aaKnown RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 WDR41Q9HAD4 459 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 EML4Q9HC35 981 aaKnown RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 ENTPD7Q9NQZ7 604 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 SMPD4Q9NXE4 827 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 THEGQ9P2T0 379 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 SLC2A6Q9UGQ3 507 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 ALPK3Q96L96 1907 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 UNC80Q8N2C7 3258 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 SZT2Q5T011 3432 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 C15orf38-AP3S2A0A0A6YYH1 394 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 PDLIM1O00151 329 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 MUSKO15146 869 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 ZMPSTE24O75844 475 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 SLC35E2BP0CK96 405 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 ATP5F1P24539 256 aaPredicted RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 ARNTP27540 789 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 MAPKAPK2P49137 400 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 SLC11A2P49281 568 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 POU4F1Q01851 419 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 NSUN2Q08J23 767 aaKnown RBP eCLIP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 GALNT1Q10472 559 aaPredicted RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 RAB33AQ14088 237 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 ESRP1Q6NXG1 681 aaKnown RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 KLHDC10Q6PID8 442 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 KIAA0408Q6ZU52 694 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms