RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 PHTF1Q9UMS5 762 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 GPR34Q9UPC5 381 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 RAI2Q9Y5P3 530 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 DGKBQ9Y6T7 804 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 PTPRQQ9UMZ3 2332 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 A0A1W2PQ67 120 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 TNFP01375 233 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 RPIAP49247 311 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 GABREP78334 506 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 ITKQ08881 620 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 PDK2Q15119 407 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 ZFYVE27Q5T4F4 411 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 ARMC12Q5T9G4 340 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 RFLNAQ6ZTI6 216 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 HEATR4Q86WZ0 1026 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 GKN2Q86XP6 184 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 LRRC49Q8IUZ0 686 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 ATL2Q8NHH9 583 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 CCL4L1Q8NHW4 92 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 SNIP1Q8TAD8 396 aaKnown RBP14.29□□□□□ -0.12
RAB28-205ENST00000508274 SLC35G2Q8TBE7 412 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 NAT6Q93015 286 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 DTD2Q96FN9 168 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 POLR1EQ9GZS1 481 aaKnown RBP14.29□□□□□ -0.12
RAB28-205ENST00000508274 TMEM168Q9H0V1 697 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 SUDS3Q9H7L9 328 aaPredicted RBP14.29□□□□□ -0.12
RAB28-205ENST00000508274 NHEJ1Q9H9Q4 299 aaPredicted RBP14.29□□□□□ -0.12
RAB28-205ENST00000508274 CYP4F12Q9HCS2 524 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 MOSPD1Q9UJG1 213 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 ENTPD2Q9Y5L3 495 aa14.29□□□□□ -0.12
RAB28-205ENST00000508274 PMS2P1A4D2B8 440 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 GOLGA6CA6NDK9 693 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 GOLGA6BA6NDN3 693 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 MATN3O15232 486 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 FZD6O60353 706 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 HLA-DQB2P05538 268 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 KRT7P08729 469 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 GOLGA6DP0CG33 693 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 CYP2A6P11509 494 aaPredicted RBP14.28□□□□□ -0.12
RAB28-205ENST00000508274 MAN1A1P33908 653 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 ABCG1P45844 678 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 PDX1P52945 283 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 IFI16Q16666 785 aaKnown RBP14.28□□□□□ -0.12
RAB28-205ENST00000508274 TBC1D25Q3MII6 688 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 C3orf38Q5JPI3 329 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 RALGPS1Q5JS13 557 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 TIGD7Q6NT04 549 aaPredicted RBP14.28□□□□□ -0.12
RAB28-205ENST00000508274 LVRNQ6Q4G3 990 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 Q6ZVL8 140 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 USP45Q70EL2 814 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 CBARPQ8N350 705 aaPredicted RBP14.28□□□□□ -0.12
RAB28-205ENST00000508274 PTCD2Q8WV60 388 aaKnown RBP14.28□□□□□ -0.12
RAB28-205ENST00000508274 CCDC74AQ96AQ1 378 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 SCRN2Q96FV2 425 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 ATXN7L3BQ96GX2 97 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 MCCC1Q96RQ3 725 aaPredicted RBP14.28□□□□□ -0.12
RAB28-205ENST00000508274 RBM22Q9NW64 420 aaKnown RBP eCLIP14.28□□□□□ -0.12
RAB28-205ENST00000508274 ZNHIT6Q9NWK9 470 aaKnown RBP14.28□□□□□ -0.12
RAB28-205ENST00000508274 GOLGA6AQ9NYA3 693 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 DTLQ9NZJ0 730 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 CD84Q9UIB8 345 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 SATB2Q9UPW6 733 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 UNC13CQ8NB66 2214 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 MGAQ8IWI9 3026 aa14.28□□□□□ -0.12
RAB28-205ENST00000508274 PRSS38A1L453 326 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 HOXC4P09017 264 aaPredicted RBP14.27□□□□□ -0.12
RAB28-205ENST00000508274 MYCLP1P12525 358 aaPredicted RBP14.27□□□□□ -0.12
RAB28-205ENST00000508274 KDELR1P24390 212 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 CCNCP24863 283 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 NIPAL4Q0D2K0 466 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 ARHGEF7Q14155 803 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 LRRC66Q68CR7 880 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 ALG1LQ6GMV1 187 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 RBM44Q6ZP01 1051 aaKnown RBP14.27□□□□□ -0.12
RAB28-205ENST00000508274 MAP7D3Q8IWC1 876 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 SDR16C5Q8N3Y7 309 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 ARRDC2Q8TBH0 407 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 SCG3Q8WXD2 468 aaKnown RBP14.27□□□□□ -0.12
RAB28-205ENST00000508274 FGF11Q92914 225 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 TSGA13Q96PP4 275 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 RNF157Q96PX1 679 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 CHKBQ9Y259 395 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 PPIL1Q9Y3C6 166 aa14.27□□□□□ -0.12
RAB28-205ENST00000508274 LRRD1A4D1F6 860 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 B4DGG1 531 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 PSMD11O00231 422 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 TNFRSF10CO14798 259 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 FUCA1P04066 466 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 TPM1P09493 284 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 CCNB1P14635 433 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 KELP23276 732 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 ACTN2P35609 894 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 CDK3Q00526 305 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 CCDC173Q0VFZ6 552 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 SPIDRQ14159 915 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 RAET1GQ6H3X3 334 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 TAF8Q7Z7C8 310 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 PLD5Q8N7P1 536 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 FAM46DQ8NEK8 389 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 GPR156Q8NFN8 814 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms