RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 COL8A1P27658 744 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 NSFP46459 744 aaKnown RBP9.05□□□□□ -0.96
RPS3A-206ENST00000507485 PEX5P50542 639 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 YBEYP58557 167 aaPredicted RBP9.05□□□□□ -0.96
RPS3A-206ENST00000507485 PTPRRQ15256 657 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 EFHC2Q5JST6 749 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 ESRP1Q6NXG1 681 aaKnown RBP9.05□□□□□ -0.96
RPS3A-206ENST00000507485 OGFOD3Q6PK18 319 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 TRIM72Q6ZMU5 477 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 CCDC81Q6ZN84 652 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 RAB11FIP2Q7L804 512 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 APTXQ7Z2E3 356 aaKnown RBP9.05□□□□□ -0.96
RPS3A-206ENST00000507485 FSTL5Q8N475 847 aaPredicted RBP9.05□□□□□ -0.96
RPS3A-206ENST00000507485 NPWQ8N729 165 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 GOLGA6L1Q8N7Z2 621 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 Q8N9G6 341 aaPredicted RBP9.05□□□□□ -0.96
RPS3A-206ENST00000507485 TSEN2Q8NCE0 465 aaKnown RBP9.05□□□□□ -0.96
RPS3A-206ENST00000507485 ENOX1Q8TC92 643 aaKnown RBP9.05□□□□□ -0.96
RPS3A-206ENST00000507485 EDARADDQ8WWZ3 215 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 CASKIN2Q8WXE0 1202 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 GLMNQ92990 594 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 PKNOX2Q96KN3 472 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 GFM1Q96RP9 751 aaKnown RBP9.05□□□□□ -0.96
RPS3A-206ENST00000507485 RBM15Q96T37 977 aaKnown RBP eCLIP9.05□□□□□ -0.966e-7■■□□□ 12.9
RPS3A-206ENST00000507485 SYT11Q9BT88 431 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 TRIM7Q9C029 511 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 NUP62CLQ9H1M0 184 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 HSD3B7Q9H2F3 369 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 LRRN3Q9H3W5 708 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 FOXJ2Q9P0K8 574 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 UBA2Q9UBT2 640 aaPredicted RBP9.05□□□□□ -0.96
RPS3A-206ENST00000507485 KLQ9UEF7 1012 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 ST14Q9Y5Y6 855 aa9.05□□□□□ -0.96
RPS3A-206ENST00000507485 A8MX80 341 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 RECQL5O94762 991 aaPredicted RBP9.04□□□□□ -0.96
RPS3A-206ENST00000507485 CTSEP14091 401 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 STAT1P42224 750 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 PAPOLAP51003 745 aaKnown RBP9.04□□□□□ -0.96
RPS3A-206ENST00000507485 COPB1P53618 953 aaKnown RBP9.04□□□□□ -0.96
RPS3A-206ENST00000507485 INHBCP55103 352 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 NFKB2Q00653 900 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 RAD51Q06609 339 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 ZFP36L1Q07352 338 aaKnown RBP9.04□□□□□ -0.96
RPS3A-206ENST00000507485 ELP6Q0PNE2 266 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 ELOCQ15369 112 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 PARP15Q460N3 678 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 AFMIDQ63HM1 303 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 LVRNQ6Q4G3 990 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 LIPIQ6XZB0 460 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 SRLQ86TD4 932 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 ZFAND4Q86XD8 727 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 SLITRK4Q8IW52 837 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 MCOLN2Q8IZK6 566 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 FBXO39Q8N4B4 442 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 ARL14Q8N4G2 192 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 HCAR2Q8TDS4 363 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 PMEPA1Q969W9 287 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 COL26A1Q96A83 441 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 ECHDC3Q96DC8 303 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 MED8Q96G25 268 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 WDR92Q96MX6 357 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 CCNL2Q96S94 520 aaPredicted RBP9.04□□□□□ -0.96
RPS3A-206ENST00000507485 AGPAT1Q99943 283 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 C1QTNF7Q9BXJ2 289 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 TMEM168Q9H0V1 697 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 PISDQ9UG56 409 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 ACSL6Q9UKU0 697 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 ATP8A1Q9Y2Q0 1164 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 PCDHGA7Q9Y5G6 932 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 DGKBQ9Y6T7 804 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 RNF215Q9Y6U7 377 aa9.04□□□□□ -0.96
RPS3A-206ENST00000507485 PRAMEF33A0A0G2JMD5 474 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 A0A0U1RQS6 177 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 TMEM110-MUSTN1A8MSY1 372 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 C9orf172C9J069 976 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 TRAFD1O14545 582 aaPredicted RBP9.03□□□□□ -0.96
RPS3A-206ENST00000507485 PRAMEF10O60809 474 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 CALB1P05937 261 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 ALPIP09923 528 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 XPAP23025 273 aaPredicted RBP9.03□□□□□ -0.96
RPS3A-206ENST00000507485 AMPD1P23109 780 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 CCKBRP32239 447 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 ARSDP51689 593 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 KIAA1024LP59773 190 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 MTM1Q13496 603 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 HLTFQ14527 1009 aaKnown RBP eCLIP9.03□□□□□ -0.96
RPS3A-206ENST00000507485 C16orf72Q14CZ0 275 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 CERCAMQ5T4B2 595 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 DNAJC24Q6P3W2 148 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 SPRED1Q7Z699 444 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 VASH2Q86V25 355 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 NRROSQ86YC3 692 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 JAMLQ86YT9 394 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 CCNJLQ8IV13 435 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 OR56A4Q8NGH8 313 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 WDR48Q8TAF3 677 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 HTR3CQ8WXA8 447 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 ZNF641Q96N77 438 aaPredicted RBP9.03□□□□□ -0.96
RPS3A-206ENST00000507485 NCAPGQ9BPX3 1015 aa9.03□□□□□ -0.96
RPS3A-206ENST00000507485 CNPY3Q9BT09 278 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms