RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SEPHS1P49903 392 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 LIG3P49916 1009 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 SH3BP2P78314 561 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 CDK17Q00537 523 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 AMPD3Q01432 767 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 ADAM9Q13443 819 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 NFATC2Q13469 925 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 IL10RAQ13651 578 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 TMEM52BQ4KMG9 183 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 CRB2Q5IJ48 1285 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 ATXN7L2Q5T6C5 722 aaPredicted RBP7.21□□□□□ -1.26
VCAN-207ENST00000507162 WDR74Q6RFH5 385 aaPredicted RBP7.21□□□□□ -1.26
VCAN-207ENST00000507162 LCLAT1Q6UWP7 414 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 LEKR1Q6ZMV7 388 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 SETD3Q86TU7 594 aaPredicted RBP7.21□□□□□ -1.26
VCAN-207ENST00000507162 TGIF2LYQ8IUE0 185 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 CEP97Q8IW35 865 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 ARFGAP1Q8N6T3 406 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 TFAP2BQ92481 460 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 HMCESQ96FZ2 354 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 SMAD5Q99717 465 aaKnown RBP7.21□□□□□ -1.26
VCAN-207ENST00000507162 LGR4Q9BXB1 951 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 GPR87Q9BY21 358 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 SEMA3GQ9NS98 782 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 DDIT4Q9NX09 232 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 MPP6Q9NZW5 540 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 TMEM63CQ9P1W3 806 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 SUCOQ9UBS9 1254 aaKnown RBP7.21□□□□□ -1.26
VCAN-207ENST00000507162 FBXO2Q9UK22 296 aaPredicted RBP7.21□□□□□ -1.26
VCAN-207ENST00000507162 FARSAQ9Y285 508 aaKnown RBP7.21□□□□□ -1.26
VCAN-207ENST00000507162 SRPRBQ9Y5M8 271 aaKnown RBP7.21□□□□□ -1.26
VCAN-207ENST00000507162 SNX10Q9Y5X0 201 aa7.21□□□□□ -1.26
VCAN-207ENST00000507162 FLNAP21333 2647 aaKnown RBP7.2□□□□□ -1.26
VCAN-207ENST00000507162 FBN1P35555 2871 aaKnown RBP7.2□□□□□ -1.26
VCAN-207ENST00000507162 THAP12O43422 761 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 BUB1BO60566 1050 aaPredicted RBP7.2□□□□□ -1.26
VCAN-207ENST00000507162 PAGE1O75459 146 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 ZMPSTE24O75844 475 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 CALCAP01258 141 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 NR3C1P04150 777 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 KRT13P13646 458 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 PDIA4P13667 645 aaKnown RBP7.2□□□□□ -1.26
VCAN-207ENST00000507162 CASP1P29466 404 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 ACTR1BP42025 376 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 NASPP49321 788 aaPredicted RBP7.2□□□□□ -1.26
VCAN-207ENST00000507162 KIAA1024LP59773 190 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 ACTR1AP61163 376 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 SNRPD1P62314 119 aaKnown RBP7.2□□□□□ -1.26
VCAN-207ENST00000507162 YWHAZP63104 245 aaKnown RBP7.2□□□□□ -1.26
VCAN-207ENST00000507162 CTBSQ01459 385 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 CEBPZQ03701 1054 aaKnown RBP7.2□□□□□ -1.26
VCAN-207ENST00000507162 ELP6Q0PNE2 266 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 NME3Q13232 169 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 POLD3Q15054 466 aaPredicted RBP7.2□□□□□ -1.26
VCAN-207ENST00000507162 LLGL1Q15334 1064 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 EFHC1Q5JVL4 640 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 CXXC5Q7LFL8 322 aaKnown RBP7.2□□□□□ -1.26
VCAN-207ENST00000507162 SYVN1Q86TM6 617 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 GUF1Q8N442 669 aaKnown RBP7.2□□□□□ -1.26
VCAN-207ENST00000507162 ZADH2Q8N4Q0 377 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 ZNF808Q8N4W9 903 aaPredicted RBP7.2□□□□□ -1.26
VCAN-207ENST00000507162 INPP5DQ92835 1189 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 BARD1Q99728 777 aaKnown RBP7.2□□□□□ -1.26
VCAN-207ENST00000507162 TRIM62Q9BVG3 475 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 OSBPL1AQ9BXW6 950 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 BLZF1Q9H2G9 400 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 TNMDQ9H2S6 317 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 POPDC2Q9HBU9 364 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 MCCC2Q9HCC0 563 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 RAB20Q9NX57 234 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 C5AR2Q9P296 337 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 AJAP1Q9UKB5 411 aaPredicted RBP7.2□□□□□ -1.26
VCAN-207ENST00000507162 KIAA1257Q9ULG3 409 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 PLEKHM1Q9Y4G2 1056 aa7.2□□□□□ -1.26
VCAN-207ENST00000507162 TRGV8A0A0C4DH27 118 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 FAM221AA4D161 298 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 RASA4BC9J798 803 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 C19orf84I3L1E1 186 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 PDE2AO00408 941 aaPredicted RBP7.19□□□□□ -1.26
VCAN-207ENST00000507162 SART1O43290 800 aaKnown RBP7.19□□□□□ -1.26
VCAN-207ENST00000507162 RASA4O43374 803 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 SRGAP2O75044 1071 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 CD160O95971 181 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 IGLV3-25P01717 112 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 FUCA1P04066 466 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 EDN3P14138 238 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 LPOP22079 712 aaPredicted RBP7.19□□□□□ -1.26
VCAN-207ENST00000507162 BRD2P25440 801 aaKnown RBP7.19□□□□□ -1.26
VCAN-207ENST00000507162 CA5AP35218 305 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 NDST2P52849 883 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 ARF5P84085 180 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 RAD51Q06609 339 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 PEX6Q13608 980 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 IL11RAQ14626 422 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 TAF5Q15542 800 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 CNGA2Q16280 664 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 VWA5B1Q5TIE3 1220 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 KRT39Q6A163 491 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 LRRC31Q6UY01 552 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 UNC13DQ70J99 1090 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms