RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 NPIPB15A6NHN6 443 aaPredicted RBP7.21□□□□□ -1.26
NUP54-204ENST00000506098 C2orf81A6NN90 581 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 C10orf142B7Z368 130 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 H7C0S8 307 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 PSMD11O00231 422 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 AURKAO14965 403 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 PLRG1O43660 514 aaKnown RBP7.21□□□□□ -1.26
NUP54-204ENST00000506098 SPAG6O75602 509 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 ALDH1A2O94788 518 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 C1QAP02745 245 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 DNTTP04053 509 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 PRKCGP05129 697 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 POLBP06746 335 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 ALPIP09923 528 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 CTPS1P17812 591 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 PGAM1P18669 254 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 NDUFV2P19404 249 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 AOC1P19801 751 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 LPOP22079 712 aaPredicted RBP7.21□□□□□ -1.26
NUP54-204ENST00000506098 NMBRP28336 390 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 VIPR1P32241 457 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 MMP12P39900 470 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 ABL2P42684 1182 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 CLCN5P51795 746 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 ZNF140P52738 457 aaPredicted RBP7.21□□□□□ -1.26
NUP54-204ENST00000506098 PMS2P54278 862 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 PTPN5P54829 565 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 TAS2R38P59533 333 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 GPX6P59796 221 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 CRADDP78560 199 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 CREB5Q02930 508 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 PTSQ03393 145 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 CNTN1Q12860 1018 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 RALGDSQ12967 914 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 AGERQ15109 404 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 PTPRRQ15256 657 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 KYNUQ16719 465 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 ANKRD20A4Q4UJ75 823 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 SPANXN3Q5MJ09 141 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 AGBL4Q5VU57 503 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 ZNF449Q6P9G9 518 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 FBXL19Q6PCT2 694 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 LIPIQ6XZB0 460 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 ZNF771Q7L3S4 317 aaPredicted RBP7.21□□□□□ -1.26
NUP54-204ENST00000506098 GLT6D1Q7Z4J2 308 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 BMP8AQ7Z5Y6 402 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 CCDC91Q7Z6B0 441 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 RASSF3Q86WH2 238 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 ANKMY2Q8IV38 441 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 CAMKK1Q8N5S9 505 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 PPHLN1Q8NEY8 458 aaKnown RBP7.21□□□□□ -1.26
NUP54-204ENST00000506098 DTX3LQ8TDB6 740 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 BLOC1S5Q8TDH9 187 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 ANKRD7Q92527 254 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 EID2BQ96D98 161 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 SIPA1Q96FS4 1042 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 C9orf72Q96LT7 481 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 ZNF778Q96MU6 729 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 SMIM14Q96QK8 99 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 EPB41L4BQ9H329 900 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 KDM4CQ9H3R0 1056 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 ZFYVE1Q9HBF4 777 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 PCDH12Q9NPG4 1184 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 CHRAC1Q9NRG0 131 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 NLE1Q9NVX2 485 aaPredicted RBP7.21□□□□□ -1.26
NUP54-204ENST00000506098 POLR3BQ9NW08 1133 aaPredicted RBP7.21□□□□□ -1.26
NUP54-204ENST00000506098 ARGLU1Q9NWB6 273 aaPredicted RBP7.21□□□□□ -1.26
NUP54-204ENST00000506098 C2orf42Q9NWW7 574 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 MOCS1Q9NZB8 636 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 NINJ2Q9NZG7 142 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.21□□□□□ -1.26
NUP54-204ENST00000506098 OGFRQ9NZT2 677 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 IL17CQ9P0M4 197 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 SAMD15Q9P1V8 674 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 USP36Q9P275 1121 aaKnown RBP7.21□□□□□ -1.26
NUP54-204ENST00000506098 NFKBIL1Q9UBC1 381 aaPredicted RBP7.21□□□□□ -1.26
NUP54-204ENST00000506098 B4GALT6Q9UBX8 382 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 ZC3H7BQ9UGR2 993 aaKnown RBP7.21□□□□□ -1.26
NUP54-204ENST00000506098 EBF1Q9UH73 591 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 CHMP2BQ9UQN3 213 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 FADS3Q9Y5Q0 445 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 SDK1Q7Z5N4 2213 aa7.21□□□□□ -1.26
NUP54-204ENST00000506098 C1orf232A0A0U1RR37 186 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 A0A1W2PP55 124 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 RGSL1A5PLK6 1076 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 TMEM221A6NGB7 291 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 M0R296 226 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 PLK4O00444 970 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 STK25O00506 426 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 RIPK2O43353 540 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 TSPAN6O43657 245 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 PI15O43692 258 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 CLDN7O95471 211 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 PDGFBP01127 241 aaPredicted RBP7.2□□□□□ -1.26
NUP54-204ENST00000506098 DCNP07585 359 aaKnown RBP7.2□□□□□ -1.26
NUP54-204ENST00000506098 ABHD2P08910 425 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 C1SP09871 688 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 PIRTP0C851 137 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 ACADMP11310 421 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 LHCGRP22888 699 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms