RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 USP1O94782 785 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 GRIA1P42261 906 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 ODF2Q5BJF6 829 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 ARHGEF18Q6ZSZ5 1173 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 USP45Q70EL2 814 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 ADAT2Q7Z6V5 191 aaKnown RBP8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 FRMD1Q8N878 549 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 MNS1Q8NEH6 495 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 FUBP1Q96AE4 644 aaKnown RBP8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 TOE1Q96GM8 510 aaKnown RBP8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 C6orf106Q9H6K1 298 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 CHKBQ9Y259 395 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 GOLGA6CA6NDK9 693 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 GOLGA6BA6NDN3 693 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 GPR89AB7ZAQ6 455 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 CHUKO15111 745 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 PYGLP06737 847 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 GPR89BP0CG08 455 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 GOLGA6DP0CG33 693 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 C6P13671 934 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 IGFALSP35858 605 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 OLIG2Q13516 323 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 LAMB3Q13751 1172 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 PRPSAP1Q14558 356 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 LLGL1Q15334 1064 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 SHBQ15464 509 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 NLRP9Q7RTR0 991 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 TSPAN33Q86UF1 283 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 SLC22A18ASQ8N1D0 253 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 TRAM1L1Q8N609 369 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 PDCD7Q8N8D1 485 aaKnown RBP8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 STYXQ8WUJ0 223 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 CAPZA3Q96KX2 299 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 LINC00615Q96LM1 132 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 TRIM51Q9BSJ1 452 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 DHRS4Q9BTZ2 278 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 GOLGA6AQ9NYA3 693 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 SLC17A4Q9Y2C5 497 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 MAGEB16A2A368 324 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 WNT1P04628 370 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 ZNF883P0CG24 379 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 ADRA1DP25100 572 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 WASP42768 502 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 YPEL5P62699 121 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 MTM1Q13496 603 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 LRRC66Q68CR7 880 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 PELI3Q8N2H9 469 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 DDHD1Q8NEL9 900 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 BAHD1Q8TBE0 780 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 BIRC7Q96CA5 298 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 RRAGDQ9NQL2 400 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 DMGDHQ9UI17 866 aaKnown RBP8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 PNMA8BQ9ULN7 279 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 SLCO1B1Q9Y6L6 691 aa8.28□□□□□ -1.08
CDC42SE2-208ENST00000505065 VILLO15195 856 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 RAD51BO15315 384 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 BPIP17213 487 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 FOXN2P32314 431 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 LIG3P49916 1009 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 CSTF1Q05048 431 aaKnown RBP8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 OVGP1Q12889 678 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 GPS1Q13098 491 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 PTPRRQ15256 657 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 LAIR1Q6GTX8 287 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 KIAA0930Q6ICG6 404 aaPredicted RBP8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 OR6K2Q8NGY2 324 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 LRRC45Q96CN5 670 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 SMIM14Q96QK8 99 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 FICDQ9BVA6 458 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 ABCG8Q9H221 673 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 RAB6BQ9NRW1 208 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 EURLQ9NYK6 297 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 DGKBQ9Y6T7 804 aa8.27□□□□□ -1.08
CDC42SE2-208ENST00000505065 PTPRBP23467 1997 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 FADS2P1A8MWK0 482 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 CHRNA4P43681 627 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 DMPKQ09013 629 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 CUL1Q13616 776 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 USP39Q53GS9 565 aaKnown RBP8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 PCID2Q5JVF3 399 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 TSTD2Q5T7W7 516 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 C17orf82Q86X59 251 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 DCP2Q8IU60 420 aaKnown RBP8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 IGDCC3Q8IVU1 814 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 OXR1Q8N573 874 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 BTBD1Q9H0C5 482 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 RAB17Q9H0T7 212 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 P2RY12Q9H244 342 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 FETUBQ9UGM5 382 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 PCDHB9Q9Y5E1 797 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 PLK4O00444 970 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 WNT9AO14904 365 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 RPP40O75818 363 aaKnown RBP8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 DKK1O94907 266 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 RECQLP46063 649 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 RXRGP48443 463 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 WSCD2Q2TBF2 565 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 CCNJLQ8IV13 435 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 GPR26Q8NDV2 337 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 HMGB4Q8WW32 186 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms