RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 SNAP91O60641 907 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 LUC7L3O95232 432 aaKnown RBP15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 SLC4A1P02730 911 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 CSF2RAP15509 400 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 IMPDH1P20839 514 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 MZF1P28698 734 aaPredicted RBP15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 ACSBG2Q5FVE4 666 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 TXNDC8Q6A555 127 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 Q6ZNB5 142 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 ULK2Q8IYT8 1036 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 KIRREL3Q8IZU9 778 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 AFAP1L2Q8N4X5 818 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 CPSF7Q8N684 471 aaKnown RBP15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 POU5F2Q8N7G0 328 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 LPCAT1Q8NF37 534 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 ADAMTS19Q8TE59 1207 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 WDR60Q8WVS4 1066 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 YME1L1Q96TA2 773 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 SHCBP1LQ9BZQ2 653 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 VPS28Q9UK41 221 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 C15orf41Q9Y2V0 281 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 OR51B4Q9Y5P0 310 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 CPQQ9Y646 472 aa15.44■□□□□ 0.06
SNCAIP-207ENST00000504884 LOC100653049A0A140TA62 436 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 PFDN6O15212 129 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 KRT34O76011 436 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 THRAP10827 490 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 COX4I1P13073 169 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 EPHA3P29320 983 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 GTF2A1P52655 376 aaPredicted RBP15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 TRMT5Q32P41 509 aaKnown RBP15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 SH2D4BQ5SQS7 431 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 LINGO4Q6UY18 593 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 FAM217AQ8IXS0 508 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 STMN2Q93045 179 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 ANKRD27Q96NW4 1050 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 TRMOQ9BU70 441 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 ALG9Q9H6U8 611 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 SYTL2Q9HCH5 934 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 CYP4F12Q9HCS2 524 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 HACD3Q9P035 362 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 LSM7Q9UK45 103 aaKnown RBP15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 VPS9D1Q9Y2B5 631 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 ZNF510Q9Y2H8 683 aa15.43■□□□□ 0.06
SNCAIP-207ENST00000504884 RGSL1A5PLK6 1076 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 NEMP1O14524 444 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 NDUFS3O75489 264 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 CD1DP15813 335 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 KCNA5P22460 613 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 SLC25A3Q00325 362 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 TIAL1Q01085 375 aaKnown RBP eCLIP15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 PDAP1Q13442 181 aaKnown RBP15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 ACCSLQ4AC99 568 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 PIM3Q86V86 326 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 MRPS31Q92665 395 aaKnown RBP15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 USP13Q92995 863 aaPredicted RBP15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 PHF21BQ96EK2 531 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 RTKNQ9BST9 563 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 CCDC68Q9H2F9 335 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 LHX3Q9UBR4 397 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 ARHGAP26Q9UNA1 814 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 LTBP2Q14767 1821 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 A0A088AWK7 358 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 H0Y3Z8 333 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 SMIM24O75264 130 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 SPATA31D3P0C874 917 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 CTSAP10619 480 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 HNRNPLP14866 589 aaKnown RBP eCLIP15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 SP100P23497 879 aaPredicted RBP15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 ITGB8P26012 769 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 GABRR2P28476 465 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 ABL2P42684 1182 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 RHOAP61586 193 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 ZXDBP98169 803 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 NFKB2Q00653 900 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 SATB1Q01826 763 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 TRAF2Q12933 501 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 CDH18Q13634 790 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 ZRSR2Q15696 482 aaKnown RBP15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 NXNQ6DKJ4 435 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 SPATA31D4Q6ZUB0 917 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 RHEBL1Q8TAI7 183 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 L3HYPDHQ96EM0 354 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 ALG14Q96F25 216 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 MAELQ96JY0 434 aaKnown RBP15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 PPP1R36Q96LQ0 422 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 LENG8Q96PV6 779 aaPredicted RBP15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 C11orf49Q9H6J7 331 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 TAS2R13Q9NYV9 303 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 GTSE1Q9NYZ3 720 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 DNMT3BQ9UBC3 853 aaKnown RBP15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 STOML1Q9UBI4 398 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 SLC7A8Q9UHI5 535 aa15.42■□□□□ 0.06
SNCAIP-207ENST00000504884 BPTFQ12830 3046 aa15.41■□□□□ 0.06
SNCAIP-207ENST00000504884 UBA6A0AVT1 1052 aaPredicted RBP15.41■□□□□ 0.06
SNCAIP-207ENST00000504884 TRIM43BA6NCK2 446 aa15.41■□□□□ 0.06
SNCAIP-207ENST00000504884 MEI4A8MW99 385 aa15.41■□□□□ 0.06
SNCAIP-207ENST00000504884 STX7O15400 261 aaKnown RBP15.41■□□□□ 0.06
SNCAIP-207ENST00000504884 TGM5O43548 720 aa15.41■□□□□ 0.06
SNCAIP-207ENST00000504884 FGF18O76093 207 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms