RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, human

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDLIM5-208	ENST00000504489	C1QTNF7	Q9BXJ2	289 aa		11.93	□□□□□ -0.5
PDLIM5-208	ENST00000504489	FSD1L	Q9BXM9	530 aa		11.93	□□□□□ -0.5
PDLIM5-208	ENST00000504489	LRRC40	Q9H9A6	602 aa		11.93	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ETNK1	Q9HBU6	452 aa		11.93	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ARNT2	Q9HBZ2	717 aa		11.93	□□□□□ -0.5
PDLIM5-208	ENST00000504489	MAGEE1	Q9HCI5	957 aa		11.93	□□□□□ -0.5
PDLIM5-208	ENST00000504489	TMEM74B	Q9NUR3	256 aa		11.93	□□□□□ -0.5
PDLIM5-208	ENST00000504489	KCTD5	Q9NXV2	234 aa		11.93	□□□□□ -0.5
PDLIM5-208	ENST00000504489	NCDN	Q9UBB6	729 aa		11.93	□□□□□ -0.5
PDLIM5-208	ENST00000504489	PCYOX1	Q9UHG3	505 aa		11.93	□□□□□ -0.5
PDLIM5-208	ENST00000504489	NEU2	Q9Y3R4	380 aa		11.93	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489		A0A1B0GTW7	788 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489		A8MX80	341 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	BCAT2	O15382	392 aa	Predicted RBP	11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	SLC31A1	O15431	190 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	LZTS3	O60299	673 aa	Predicted RBP	11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	AP2A1	O95782	977 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	GAS8	O95995	478 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	AGT	P01019	485 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	KRT14	P02533	472 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	HNRNPA2B1	P22626	353 aa	Known RBP	11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	LHCGR	P22888	699 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	AKT2	P31751	481 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	RACK1	P63244	317 aa	Known RBP	11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	PTS	Q03393	145 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	TUBB2A	Q13885	445 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ARHGEF7	Q14155	803 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	DUOXA1	Q1HG43	343 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	FAXC	Q5TGI0	409 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ASCL5	Q7RTU5	278 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	TSPAN33	Q86UF1	283 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	LAPTM4B	Q86VI4	370 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	TMEM145	Q8NBT3	493 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	DENND6B	Q8NEG7	585 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	FAM174A	Q8TBP5	190 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	RUBCN	Q92622	972 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	CENPT	Q96BT3	561 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	SERAC1	Q96JX3	654 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	COQ10A	Q96MF6	247 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	KLF6	Q99612	283 aa	Predicted RBP	11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	TBL1Y	Q9BQ87	522 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	TUBB2B	Q9BVA1	445 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	FICD	Q9BVA6	458 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	DDX47	Q9H0S4	455 aa	Known RBP	11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	MIR1-1HG	Q9H1L0	117 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	TRABD	Q9H4I3	376 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	TM9SF3	Q9HD45	589 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	RAB6B	Q9NRW1	208 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	CDC23	Q9UJX2	597 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	HS3ST3A1	Q9Y663	406 aa		11.92	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ATXN2	Q99700	1313 aa	Known RBP	11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	PCNX2	A6NKB5	2137 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	RAD51B	O15315	384 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	RECQL5	O94762	991 aa	Predicted RBP	11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	URI1	O94763	535 aa	Predicted RBP	11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	SUN1	O94901	812 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	CLDN7	O95471	211 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ZNF806	P0C7X5	589 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	GM2A	P17900	193 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	CHRNA4	P43681	627 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	AFF3	P51826	1226 aa	Known RBP	11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	STC1	P52823	247 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	STAT4	Q14765	748 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ACOX1	Q15067	660 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	LRRC66	Q68CR7	880 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	DENND5A	Q6IQ26	1287 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	SLC23A3	Q6PIS1	610 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	TECPR1	Q7Z6L1	1165 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	LINC00523	Q86TU6	105 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ZCCHC9	Q8N567	271 aa	Known RBP	11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	TAB3	Q8N5C8	712 aa	Predicted RBP	11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	SLC25A41	Q8N5S1	370 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	MFSD2A	Q8NA29	543 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	SPATA4	Q8NEY3	305 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ANKK1	Q8NFD2	765 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	KIF18A	Q8NI77	898 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ZNF592	Q92610	1267 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	SLC6A18	Q96N87	628 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ZFYVE1	Q9HBF4	777 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	EIF2B3	Q9NR50	452 aa	Known RBP	11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	HACD3	Q9P035	362 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	COQ6	Q9Y2Z9	468 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ZNF711	Q9Y462	761 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	SLCO1B1	Q9Y6L6	691 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ZNF292	O60281	2723 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	DMD	P11532	3685 aa		11.91	□□□□□ -0.5
PDLIM5-208	ENST00000504489	C1orf232	A0A0U1RR37	186 aa		11.9	□□□□□ -0.5
PDLIM5-208	ENST00000504489		A0A1W2PR77	199 aa		11.9	□□□□□ -0.5
PDLIM5-208	ENST00000504489	RGSL1	A5PLK6	1076 aa		11.9	□□□□□ -0.5
PDLIM5-208	ENST00000504489		E7EVH7	732 aa		11.9	□□□□□ -0.5
PDLIM5-208	ENST00000504489	WNT9A	O14904	365 aa		11.9	□□□□□ -0.5
PDLIM5-208	ENST00000504489	KHNYN	O15037	678 aa	Known RBP	11.9	□□□□□ -0.5
PDLIM5-208	ENST00000504489	USP12	O75317	370 aa		11.9	□□□□□ -0.5
PDLIM5-208	ENST00000504489	ECEL1	O95672	775 aa		11.9	□□□□□ -0.5
PDLIM5-208	ENST00000504489	APRT	P07741	180 aa		11.9	□□□□□ -0.5
PDLIM5-208	ENST00000504489	C1S	P09871	688 aa		11.9	□□□□□ -0.5

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