RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 RPS6KL1Q9Y6S9 549 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 CCDC151A5D8V7 595 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 PLRG1O43660 514 aaKnown RBP20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 PGAM1P18669 254 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 LIG3P49916 1009 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 ADPRHP54922 357 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 PDE1BQ01064 536 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 KYNUQ16719 465 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 TMEM52BQ4KMG9 183 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 TMEM31Q5JXX7 168 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 ESRP1Q6NXG1 681 aaKnown RBP20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 NLRP9Q7RTR0 991 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 OR4K2Q8NGD2 314 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 STYXQ8WUJ0 223 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 CFAP36Q96G28 342 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 CDC42EP4Q9H3Q1 356 aaKnown RBP20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 SEMA4AQ9H3S1 761 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 BPIFA1Q9NP55 256 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 IL17CQ9P0M4 197 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 SLC2A6Q9UGQ3 507 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 ZDBF2Q9HCK1 2354 aa20.41■□□□□ 0.86
CDC42SE2-206ENST00000503291 H0Y858 1186 aa20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 TSPAN6O43657 245 aa20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 PCDH8O95206 1070 aa20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 POLBP06746 335 aa20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 NUMA1Q14980 2115 aa20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 MAP9Q49MG5 647 aa20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 ANKRD20A4Q4UJ75 823 aa20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 CBARPQ8N350 705 aaPredicted RBP20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 FBXL6Q8N531 539 aa20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 OR13C4Q8NGS5 318 aa20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 FCRL3Q96P31 734 aaPredicted RBP20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 PLAC1Q9HBJ0 212 aa20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 LRRC4CQ9HCJ2 640 aa20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 CACNA1IQ9P0X4 2223 aa20.4■□□□□ 0.86
CDC42SE2-206ENST00000503291 GOLGA8CPA6NN73 597 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 TNFRSF10AO00220 468 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 STX7O15400 261 aaKnown RBP20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 MMP20O60882 483 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 USP1O94782 785 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 IGLV3-19P01714 112 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 ELFN1P0C7U0 828 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 SSTR1P30872 391 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 ACSL1P33121 698 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 ZNF140P52738 457 aaPredicted RBP20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 STC1P52823 247 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 PMS2P54278 862 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 SKIDA1Q1XH10 827 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 UNC5AQ6ZN44 842 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 CAVIN3Q969G5 261 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 BTBD1Q9H0C5 482 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 TREX1Q9NSU2 369 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 CYP8B1Q9UNU6 501 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 PKP3Q9Y446 797 aa20.39■□□□□ 0.86
CDC42SE2-206ENST00000503291 ZNF217O75362 1048 aa20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 ERLIN1O75477 346 aa20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 TTC4O95801 387 aa20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 C1SP09871 688 aa20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 TMPRSS15P98073 1019 aa20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 CAPN12Q6ZSI9 719 aa20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 C3orf62Q6ZUJ4 267 aa20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 HSD11B1LQ7Z5J1 315 aa20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 OR13J1Q8NGT2 312 aa20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 CXorf40AQ8TE69 158 aa20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 PEX13Q92968 403 aa20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 ZNF669Q96BR6 464 aaPredicted RBP20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 DNAJC1Q96KC8 554 aaKnown RBP20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 NLE1Q9NVX2 485 aaPredicted RBP20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 NINJ2Q9NZG7 142 aa20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 RIMKLBQ9ULI2 386 aa20.39■□□□□ 0.85
CDC42SE2-206ENST00000503291 BPTFQ12830 3046 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 TBC1D3DA0A087WVF3 549 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 TBC1D3IA0A087WXS9 549 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 TBC1D3EA0A087X179 549 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 TBC1D3KA0A087X1G2 549 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 ZCWPW2A0A1B0GU75 182 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 TBC1D3FA6NER0 549 aaPredicted RBP20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 PRR23AA6NEV1 266 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 FAM47DPA6NHR8 397 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 TBC1D3LB9A6J9 549 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 LAMTOR5O43504 91 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 TBC1D3HP0C7X1 549 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 GPX6P59796 221 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 CRYMQ14894 314 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 UBAP2Q5T6F2 1119 aaKnown RBP20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 TBC1D3GQ6DHY5 549 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 TBC1D3CQ6IPX1 549 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 TSSK4Q6SA08 328 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 TRMT10CQ7L0Y3 403 aaKnown RBP20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 C1orf210Q8IVY1 113 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 TBC1D3Q8IZP1 549 aaPredicted RBP20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 RLN3Q8WXF3 142 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 KDM4CQ9H3R0 1056 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 SGK2Q9HBY8 427 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 FAM169AQ9Y6X4 670 aa20.38■□□□□ 0.85
CDC42SE2-206ENST00000503291 PSMD11O00231 422 aa20.37■□□□□ 0.85
CDC42SE2-206ENST00000503291 CCL22O00626 93 aa20.37■□□□□ 0.85
CDC42SE2-206ENST00000503291 SPINT3P49223 89 aa20.37■□□□□ 0.85
CDC42SE2-206ENST00000503291 ACVR1Q04771 509 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms