RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 KRT10P13645 584 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 JUPP14923 745 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 TRIM23P36406 574 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 CDKN2BP42772 138 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 EPHB1P54762 984 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 SRP54P61011 504 aaKnown RBP18.41■□□□□ 0.54
HOXD11-202ENST00000498438 CAMK2BQ13554 666 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 TCEA2Q15560 299 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 FAM182AQ5T1J6 154 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 C11orf63Q6NUN7 778 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 PNCKQ6P2M8 343 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 RD3Q7Z3Z2 195 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 NDUFAF2Q8N183 169 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 CBARPQ8N350 705 aaPredicted RBP18.41■□□□□ 0.54
HOXD11-202ENST00000498438 CEP41Q9BYV8 373 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 EVA1BQ9NVM1 165 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 CHKBQ9Y259 395 aa18.41■□□□□ 0.54
HOXD11-202ENST00000498438 A0A0J9YYE9 177 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 RCCD1A6NED2 376 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 TMEM202A6NGA9 273 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 PSMD11O00231 422 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 IPO7O95373 1038 aaKnown RBP18.4■□□□□ 0.54
HOXD11-202ENST00000498438 PRLP01236 227 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 TRBC1P01850 177 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 ANXA6P08133 673 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 CA4P22748 312 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 CD86P42081 329 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 MARCKSL1P49006 195 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 DUSP3P51452 185 aaPredicted RBP18.4■□□□□ 0.54
HOXD11-202ENST00000498438 E2F1Q01094 437 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 INSM1Q01101 510 aaPredicted RBP18.4■□□□□ 0.54
HOXD11-202ENST00000498438 LLGL1Q15334 1064 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 TAZQ16635 292 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 C6orf132Q5T0Z8 1188 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 LRRC66Q68CR7 880 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 SPOCD1Q6ZMY3 1216 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 B4GALNT4Q76KP1 1039 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 FSTL5Q8N475 847 aaPredicted RBP18.4■□□□□ 0.54
HOXD11-202ENST00000498438 CNTD1Q8N815 330 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 OR56A4Q8NGH8 313 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 MDM1Q8TC05 714 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 OR1E3Q8WZA6 343 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 BOCQ9BWV1 1114 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 LGR4Q9BXB1 951 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 FGF22Q9HCT0 170 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 KCTD5Q9NXV2 234 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 NCKIPSDQ9NZQ3 722 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 SEPT10Q9P0V9 454 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 SALL4Q9UJQ4 1053 aa18.4■□□□□ 0.54
HOXD11-202ENST00000498438 PKD1L2Q7Z442 2459 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 TRABD2BA6NFA1 517 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 CAPN8A6NHC0 703 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 YY2O15391 372 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 KRT37O76014 449 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 MMP2P08253 660 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 HOXC4P09017 264 aaPredicted RBP18.39■□□□□ 0.53
HOXD11-202ENST00000498438 CTSEP14091 401 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 TARDBPQ13148 414 aaKnown RBP eCLIP18.39■□□□□ 0.53
HOXD11-202ENST00000498438 TFDP2Q14188 446 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 ELOCQ15369 112 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 CDKN3Q16667 212 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 KAZNQ674X7 775 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 GUSBP11Q6P575 273 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 CRTC1Q6UUV9 634 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 RAD9BQ6WBX8 426 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 Q6ZVL8 140 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 DAAM2Q86T65 1068 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 KATNAL2Q8IYT4 538 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 LPCAT1Q8NF37 534 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 IFI44Q8TCB0 444 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 CCDC86Q9H6F5 360 aaKnown RBP18.39■□□□□ 0.53
HOXD11-202ENST00000498438 PCDH9Q9HC56 1237 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 DOLKQ9UPQ8 538 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 REXO2Q9Y3B8 237 aaKnown RBP18.39■□□□□ 0.53
HOXD11-202ENST00000498438 DGKBQ9Y6T7 804 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 RP1P56715 2156 aa18.39■□□□□ 0.53
HOXD11-202ENST00000498438 GOLGA6CA6NDK9 693 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 GOLGA6BA6NDN3 693 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 CST8O60676 142 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 TNFP01375 233 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 GP1BAP07359 652 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 GOLGA6DP0CG33 693 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 MYCLP1P12525 358 aaPredicted RBP18.38■□□□□ 0.53
HOXD11-202ENST00000498438 PECAM1P16284 738 aaPredicted RBP18.38■□□□□ 0.53
HOXD11-202ENST00000498438 ZNF30P17039 623 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 KELP23276 732 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 RPL26P61254 145 aaKnown RBP18.38■□□□□ 0.53
HOXD11-202ENST00000498438 SKOR1P84550 965 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 NR0B2Q15466 257 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 RAET1GQ6H3X3 334 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 TECPR1Q7Z6L1 1165 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 HEATR4Q86WZ0 1026 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 PROSER1Q86XN7 944 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 SLC35F3Q8IY50 421 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 PDCD7Q8N8D1 485 aaKnown RBP18.38■□□□□ 0.53
HOXD11-202ENST00000498438 ACRBPQ8NEB7 543 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 KRT35Q92764 455 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 AGAP3Q96P47 875 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 BRD8Q9H0E9 1235 aa18.38■□□□□ 0.53
HOXD11-202ENST00000498438 MRPL40Q9NQ50 206 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms