RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 CEP290O15078 2479 aa7.71□□□□□ -1.17
CDC42-205ENST00000498236 NUP210Q8TEM1 1887 aaPredicted RBP7.71□□□□□ -1.18
CDC42-205ENST00000498236 IQANK1A0A1B0GTG1 560 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 HEATR9A2RTY3 570 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 MROH6A6NGR9 719 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 CXorf49A8MYA2 514 aaPredicted RBP7.71□□□□□ -1.18
CDC42-205ENST00000498236 INSIG1O15503 277 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 PRPF4O43172 522 aaKnown RBP eCLIP7.71□□□□□ -1.181e-7■■■■□ 24.7
CDC42-205ENST00000498236 SNAP91O60641 907 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 KRT37O76014 449 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 TMCC1O94876 653 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 NDST3O95803 873 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 GLP2RO95838 553 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 INHBAP08476 426 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 ALADP13716 330 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 ATF4P18848 351 aaPredicted RBP7.71□□□□□ -1.18
CDC42-205ENST00000498236 PSMA3P25788 255 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 HPDP32754 393 aaPredicted RBP7.71□□□□□ -1.18
CDC42-205ENST00000498236 SERPINH1P50454 418 aaKnown RBP7.71□□□□□ -1.18
CDC42-205ENST00000498236 GYS2P54840 703 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 MAXP61244 160 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 AP1S1P61966 158 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 SULT2A1Q06520 285 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 CDK18Q07002 472 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 ITKQ08881 620 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 HYAL1Q12794 435 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 LMAN2Q12907 356 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 DNAJC3Q13217 504 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 EFTUD2Q15029 972 aaKnown RBP eCLIP7.71□□□□□ -1.183e-7■■■□□ 16.7
CDC42-205ENST00000498236 TMED2Q15363 201 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 TERF2Q15554 542 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 PLEKHG6Q3KR16 790 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 ANKRD54Q6NXT1 300 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 TRMT10BQ6PF06 316 aaKnown RBP7.71□□□□□ -1.18
CDC42-205ENST00000498236 TMC5Q6UXY8 1006 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 TIFABQ6ZNK6 161 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 TPGS1Q6ZTW0 290 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 TMEM25Q86YD3 366 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 C12orf76Q8N812 135 aaPredicted RBP7.71□□□□□ -1.18
CDC42-205ENST00000498236 PPHLN1Q8NEY8 458 aaKnown RBP7.71□□□□□ -1.18
CDC42-205ENST00000498236 OSCP1Q8WVF1 389 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 SMARCD2Q92925 531 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 ISG20Q96AZ6 181 aaKnown RBP7.71□□□□□ -1.18
CDC42-205ENST00000498236 EAF1Q96JC9 268 aaPredicted RBP7.71□□□□□ -1.18
CDC42-205ENST00000498236 FCRL3Q96P31 734 aaPredicted RBP7.71□□□□□ -1.18
CDC42-205ENST00000498236 APOL2Q9BQE5 337 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 PRO3102Q9H379 93 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 NOD2Q9HC29 1040 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 CHRAC1Q9NRG0 131 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 SMYD2Q9NRG4 433 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 TREX1Q9NSU2 369 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 ABCB8Q9NUT2 735 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 NSMCE4AQ9NXX6 385 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 LHX3Q9UBR4 397 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 TBK1Q9UHD2 729 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 FBXO10Q9UK96 956 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 MKL2Q9ULH7 1088 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 HS3ST2Q9Y278 367 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 TCAF1Q9Y4C2 921 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 MYO7AQ13402 2215 aa7.71□□□□□ -1.18
CDC42-205ENST00000498236 HOXC11O43248 304 aaPredicted RBP7.7□□□□□ -1.18
CDC42-205ENST00000498236 KRT38O76015 456 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 SNRPAP09012 282 aaKnown RBP7.7□□□□□ -1.18
CDC42-205ENST00000498236 TYRP14679 529 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 BRAFP15056 766 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 TPH1P17752 444 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 KRT15P19012 456 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 PAMP19021 973 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 CA4P22748 312 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 HLA-FP30511 346 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 CD70P32970 193 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 MDH1P40925 334 aaKnown RBP7.7□□□□□ -1.18
CDC42-205ENST00000498236 RGRP47804 291 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 ARCN1P48444 511 aaKnown RBP7.7□□□□□ -1.18
CDC42-205ENST00000498236 ACVR1Q04771 509 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 ILF2Q12905 390 aaKnown RBP7.7□□□□□ -1.18
CDC42-205ENST00000498236 ADAM15Q13444 863 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 CBX2Q14781 532 aaPredicted RBP7.7□□□□□ -1.18
CDC42-205ENST00000498236 POU6F1Q14863 301 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 PITRM1Q5JRX3 1037 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 FAM78AQ5JUQ0 283 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 SIRPB2Q5JXA9 342 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 PDPK2PQ6A1A2 396 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 KIAA0930Q6ICG6 404 aaPredicted RBP7.7□□□□□ -1.18
CDC42-205ENST00000498236 SYCE2Q6PIF2 218 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 NCEH1Q6PIU2 408 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 LEKR1Q6ZMV7 388 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 SH2D5Q6ZV89 423 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 CNTN4Q8IWV2 1026 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 CTAGE3PQ8IX95 158 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 APCDD1Q8J025 514 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.7□□□□□ -1.18
CDC42-205ENST00000498236 PPM1NQ8N819 430 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 ING5Q8WYH8 240 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 FGF13Q92913 245 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 E2F7Q96AV8 911 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 ZNF669Q96BR6 464 aaPredicted RBP7.7□□□□□ -1.18
CDC42-205ENST00000498236 SEC16BQ96JE7 1060 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 LRRC3BQ96PB8 259 aa7.7□□□□□ -1.18
CDC42-205ENST00000498236 CPNE1Q99829 537 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms