RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 USP47Q96K76 1375 aa4.24□□□□□ -1.73
TRIM4-205ENST00000496896 EIF2AK4Q9P2K8 1649 aaKnown RBP4.24□□□□□ -1.73
TRIM4-205ENST00000496896 GRIN2AQ12879 1464 aa4.24□□□□□ -1.73
TRIM4-205ENST00000496896 CEP170Q5SW79 1584 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 GPATCH8Q9UKJ3 1502 aaKnown RBP4.23□□□□□ -1.73
TRIM4-205ENST00000496896 PRAC2D3DTV9 90 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 NDUFS7O75251 213 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 KDM4BO94953 1096 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 CLDN14O95500 239 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 IGLV2-11P01706 119 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 MMP2P08253 660 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 ANOS1P23352 680 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 MCM3P25205 808 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 STX2P32856 288 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 CCT5P48643 541 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 HIST2H2ACQ16777 129 aaPredicted RBP4.23□□□□□ -1.73
TRIM4-205ENST00000496896 KRT24Q2M2I5 525 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 TMEM81Q6P7N7 255 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 USP43Q70EL4 1123 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 ZNF771Q7L3S4 317 aaPredicted RBP4.23□□□□□ -1.73
TRIM4-205ENST00000496896 LINGO2Q7L985 606 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 ZNF329Q86UD4 541 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 PLD5Q8N7P1 536 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 ANKRD42Q8N9B4 389 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 BEST2Q8NFU1 509 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 LNX1Q8TBB1 728 aaPredicted RBP4.23□□□□□ -1.73
TRIM4-205ENST00000496896 CREB3L4Q8TEY5 395 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 TANKQ92844 425 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 C17orf75Q9HAS0 396 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 PCDH9Q9HC56 1237 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 DONSONQ9NYP3 566 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 CISD1Q9NZ45 108 aaKnown RBP4.23□□□□□ -1.73
TRIM4-205ENST00000496896 SNX9Q9Y5X1 595 aa4.23□□□□□ -1.73
TRIM4-205ENST00000496896 NUP160Q12769 1436 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 EIF3FO00303 357 aaPredicted RBP4.22□□□□□ -1.73
TRIM4-205ENST00000496896 TCERG1O14776 1098 aaKnown RBP4.22□□□□□ -1.73
TRIM4-205ENST00000496896 PLRG1O43660 514 aaKnown RBP4.22□□□□□ -1.73
TRIM4-205ENST00000496896 MT-CYBP00156 380 aaPredicted RBP4.22□□□□□ -1.73
TRIM4-205ENST00000496896 AFPP02771 609 aaKnown RBP4.22□□□□□ -1.73
TRIM4-205ENST00000496896 URODP06132 367 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 UMODP07911 640 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 ETFAP13804 333 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 AMD1P17707 334 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 DGKAP23743 735 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 POU1F1P28069 291 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 GABRB2P47870 512 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 CDH15P55291 814 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 FOXD4Q12950 439 aaPredicted RBP4.22□□□□□ -1.73
TRIM4-205ENST00000496896 CAMK1Q14012 370 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 VEPH1Q14D04 833 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 KRTAP24-1Q3LI83 254 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 TXNDC8Q6A555 127 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 CPLX2Q6PUV4 134 aaKnown RBP4.22□□□□□ -1.73
TRIM4-205ENST00000496896 CYP26C1Q6V0L0 522 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 C9orf139Q6ZV77 190 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 MTSS1LQ765P7 747 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 GPAT4Q86UL3 456 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 SECTM1Q8WVN6 248 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 FEM1CQ96JP0 617 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 FUZQ9BT04 418 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 RRP7BPQ9NSQ0 103 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 MCM9Q9NXL9 1143 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 HSF4Q9ULV5 492 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 VDAC3Q9Y277 283 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 MAST1Q9Y2H9 1570 aa4.22□□□□□ -1.73
TRIM4-205ENST00000496896 ANKRD50Q9ULJ7 1429 aa4.21□□□□□ -1.73
TRIM4-205ENST00000496896 GOLGA6L9A6NEM1 432 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 PRSS47A8MTI9 375 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 HNRNPCL2B2RXH8 293 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 PLGP00747 810 aaPredicted RBP4.21□□□□□ -1.74
TRIM4-205ENST00000496896 GALTP07902 379 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 IFIT1P09914 478 aaKnown RBP4.21□□□□□ -1.74
TRIM4-205ENST00000496896 IRF1P10914 325 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 BRWD1-AS2P59051 145 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 SEC61BP60468 96 aaKnown RBP4.21□□□□□ -1.74
TRIM4-205ENST00000496896 ACSM2AQ08AH3 577 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 NFIL3Q16649 462 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 TCTN1Q2MV58 587 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 ACCSLQ4AC99 568 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 SGO1Q5FBB7 561 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 PLEKHA7Q6IQ23 1121 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 CCNI2Q6ZMN8 369 aaPredicted RBP4.21□□□□□ -1.74
TRIM4-205ENST00000496896 KRBA2Q6ZNG9 492 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 FOXL2NBQ6ZUU3 175 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 RRM2BQ7LG56 351 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 SMIM29Q86T20 159 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 LMNTD1Q8N9Z9 388 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 FIG4Q92562 907 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 C3orf30Q96M34 536 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 GPR63Q9BZJ6 419 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 ESRP2Q9H6T0 727 aaKnown RBP4.21□□□□□ -1.74
TRIM4-205ENST00000496896 PPCSQ9HAB8 311 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 NOX4Q9NPH5 578 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 MKKSQ9NPJ1 570 aaPredicted RBP4.21□□□□□ -1.74
TRIM4-205ENST00000496896 TCF7L2Q9NQB0 619 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 DDX4Q9NQI0 724 aaKnown RBP4.21□□□□□ -1.74
TRIM4-205ENST00000496896 C1RLQ9NZP8 487 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 MDFICQ9P1T7 246 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 HSPB7Q9UBY9 170 aa4.21□□□□□ -1.74
TRIM4-205ENST00000496896 STON1Q9Y6Q2 735 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms