RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CES1P23141 567 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 SUOXP51687 545 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 INHBCP55103 352 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 FLOT2Q14254 428 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 GPNMBQ14956 572 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 USP41Q3LFD5 358 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 PIGGQ5H8A4 983 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 HECTD3Q5T447 861 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 SLC8B1Q6J4K2 584 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 TAS1R1Q7RTX1 841 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 PIM3Q86V86 326 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 TMEM173Q86WV6 379 aaPredicted RBP11.08□□□□□ -0.64
CMSS1-208ENST00000496116 FAM126BQ8IXS8 530 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 OR7D4Q8NG98 312 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 OR52K2Q8NGK3 314 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 RHEBL1Q8TAI7 183 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 RMDN1Q96DB5 314 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 SPDL1Q96EA4 605 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 CDKN2AIPNLQ96HQ2 116 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 TRIB3Q96RU7 358 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 CCDC68Q9H2F9 335 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 GSTO2Q9H4Y5 243 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 SYTL2Q9HCH5 934 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 MRPL40Q9NQ50 206 aaKnown RBP11.08□□□□□ -0.64
CMSS1-208ENST00000496116 NLE1Q9NVX2 485 aaPredicted RBP11.08□□□□□ -0.64
CMSS1-208ENST00000496116 UTP6Q9NYH9 597 aaKnown RBP11.08□□□□□ -0.64
CMSS1-208ENST00000496116 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.08□□□□□ -0.64
CMSS1-208ENST00000496116 ILVBLA1L0T0 632 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 KIF1CO43896 1103 aaKnown RBP11.08□□□□□ -0.64
CMSS1-208ENST00000496116 RHOCP08134 193 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 ME2P23368 584 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 ALDH7A1P49419 539 aaKnown RBP11.08□□□□□ -0.64
CMSS1-208ENST00000496116 SCNN1BP51168 640 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 C1QTNF8P60827 252 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 HERVK_113P63132 956 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 ZNF177Q13360 481 aaPredicted RBP11.08□□□□□ -0.64
CMSS1-208ENST00000496116 ZNF423Q2M1K9 1284 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 TYSND1Q2T9J0 566 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 MMEL1Q495T6 779 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 ZFP1Q6P2D0 407 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 AFTPHQ6ULP2 937 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 GLT6D1Q7Z4J2 308 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 DENND1CQ8IV53 801 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 RYBPQ8N488 228 aaPredicted RBP11.08□□□□□ -0.64
CMSS1-208ENST00000496116 PNPLA1Q8N8W4 532 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 SLAIN1Q8ND83 568 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 UCMAQ8WVF2 138 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 PPP2R3CQ969Q6 453 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 AARSD1Q9BTE6 412 aaKnown RBP11.08□□□□□ -0.64
CMSS1-208ENST00000496116 ERVK-6Q9BXR3 956 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 SCUBE2Q9NQ36 999 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 ZDHHC7Q9NXF8 308 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 MTRRQ9UBK8 725 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 PSMD13Q9UNM6 376 aa11.08□□□□□ -0.64
CMSS1-208ENST00000496116 ZNF840PA6NDX5 716 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 TCAF2A6NFQ2 919 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 C2orf81A6NN90 581 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 CASQ2O14958 399 aaPredicted RBP11.07□□□□□ -0.64
CMSS1-208ENST00000496116 PFDN6O15212 129 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 PIRTP0C851 137 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 CD1EP15812 388 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 OR1D2P34982 312 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 THOP1P52888 689 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 FASTKQ14296 549 aaKnown RBP11.07□□□□□ -0.64
CMSS1-208ENST00000496116 PTPRCAPQ14761 206 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 TAF1AQ15573 450 aaPredicted RBP11.07□□□□□ -0.64
CMSS1-208ENST00000496116 ZNF549Q6P9A3 640 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 CHST9Q7L1S5 443 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 PDSS2Q86YH6 399 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 CLYBLQ8N0X4 340 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 GDPD5Q8WTR4 605 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 DLG3Q92796 817 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 GATA6Q92908 595 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 PTERQ96BW5 349 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 TMA16Q96EY4 203 aaKnown RBP11.07□□□□□ -0.64
CMSS1-208ENST00000496116 TCF12Q99081 682 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 CFHR5Q9BXR6 569 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 TFB2MQ9H5Q4 396 aaKnown RBP11.07□□□□□ -0.64
CMSS1-208ENST00000496116 TRPM5Q9NZQ8 1165 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 C6orf203Q9P0P8 240 aaPredicted RBP11.07□□□□□ -0.64
CMSS1-208ENST00000496116 DLGAP2Q9P1A6 1054 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 ADAMTS6Q9UKP5 1117 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 VPS9D1Q9Y2B5 631 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 BACE2Q9Y5Z0 518 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 BRCA2P51587 3418 aa11.07□□□□□ -0.64
CMSS1-208ENST00000496116 A0A1B0GVM2 712 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 UBA6A0AVT1 1052 aaPredicted RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 DPPA5A6NC42 116 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 PSMD12O00232 456 aaPredicted RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 COCHO43405 550 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 GJB5O95377 273 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 RPS24P62847 133 aaKnown RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 PTK2BQ14289 1009 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 SEMA3AQ14563 771 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 TRIP10Q15642 601 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 TAF12Q16514 161 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 KIAA1841Q6NSI8 718 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 RNF111Q6ZNA4 994 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 RPS27LQ71UM5 84 aaKnown RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 CRIPAKQ8N1N5 446 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms