RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 TBC1D3FA6NER0 549 aaPredicted RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 FAM47DPA6NHR8 397 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 LRRC72A6NJI9 287 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 TBC1D3LB9A6J9 549 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 MMP20O60882 483 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 SEMA4FO95754 770 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 TBC1D3HP0C7X1 549 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 MYBL2P10244 700 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 FNTBP49356 437 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 STC1P52823 247 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 PDE1BQ01064 536 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 ELF2Q15723 593 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 USP39Q53GS9 565 aaKnown RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 TBC1D3GQ6DHY5 549 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 TBC1D3CQ6IPX1 549 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 NEK5Q6P3R8 708 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 TBC1D3Q8IZP1 549 aaPredicted RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 MYRIPQ8NFW9 859 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 PTCD2Q8WV60 388 aaKnown RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 LRRC39Q96DD0 335 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 STAMBPL1Q96FJ0 436 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 KIFC1Q9BW19 673 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 TSPYL1Q9H0U9 437 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 SAYSD1Q9NPB0 183 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 CHRAC1Q9NRG0 131 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 SAMD15Q9P1V8 674 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 SOX13Q9UN79 622 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 KCTD3Q9Y597 815 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 MAD1L1Q9Y6D9 718 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 TEX264Q9Y6I9 313 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 PLXND1Q9Y4D7 1925 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 EML5Q05BV3 1969 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 MAGEB16A2A368 324 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 PRR23AA6NEV1 266 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 PSMD11O00231 422 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 CTIFO43310 598 aaKnown RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 BUD23O43709 281 aaKnown RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 TUBBP07437 444 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 C1SP09871 688 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 C6P13671 934 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 LPOP22079 712 aaPredicted RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 MCM3P25205 808 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 ELK3P41970 407 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 ZNF140P52738 457 aaPredicted RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 RPS21P63220 83 aaKnown RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 FASTKD3Q14CZ7 662 aaKnown RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 HP1BP3Q5SSJ5 553 aaPredicted RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 KIAA1161Q6NSJ0 714 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 CEP128Q6ZU80 1094 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 NLRP9Q7RTR0 991 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 HSD11B1LQ7Z5J1 315 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 WDR5BQ86VZ2 330 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 IGDCC3Q8IVU1 814 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 GSPT2Q8IYD1 628 aaKnown RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 ZBED8Q8IZ13 594 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.48■□□□□ 0.71
ATG3-208ENST00000495756 SPACA7Q96KW9 195 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 EBNA1BP2Q99848 306 aaKnown RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 WDR83Q9BRX9 315 aaKnown RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 MRM3Q9HC36 420 aaKnown RBP19.48■□□□□ 0.71
ATG3-208ENST00000495756 IL17CQ9P0M4 197 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 RAB21Q9UL25 225 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 INVSQ9Y283 1065 aa19.48■□□□□ 0.71
ATG3-208ENST00000495756 WDFY4Q6ZS81 3184 aa19.47■□□□□ 0.71
ATG3-208ENST00000495756 LRRK1Q38SD2 2015 aa19.47■□□□□ 0.71
ATG3-208ENST00000495756 A0A1W2PQU0 124 aa19.47■□□□□ 0.71
ATG3-208ENST00000495756 RNGTTO60942 597 aaKnown RBP19.47■□□□□ 0.71
ATG3-208ENST00000495756 PTPRCAPQ14761 206 aa19.47■□□□□ 0.71
ATG3-208ENST00000495756 TMEM259Q4ZIN3 620 aa19.47■□□□□ 0.71
ATG3-208ENST00000495756 SEL1L3Q68CR1 1132 aa19.47■□□□□ 0.71
ATG3-208ENST00000495756 LONP2Q86WA8 852 aa19.47■□□□□ 0.71
ATG3-208ENST00000495756 HORMAD1Q86X24 394 aa19.47■□□□□ 0.71
ATG3-208ENST00000495756 COQ10AQ96MF6 247 aa19.47■□□□□ 0.71
ATG3-208ENST00000495756 ZNF778Q96MU6 729 aa19.47■□□□□ 0.71
ATG3-208ENST00000495756 NAT9Q9BTE0 207 aa19.47■□□□□ 0.71
ATG3-208ENST00000495756 ZFR2Q9UPR6 939 aaKnown RBP19.47■□□□□ 0.71
ATG3-208ENST00000495756 CHMP2BQ9UQN3 213 aa19.47■□□□□ 0.71
ATG3-208ENST00000495756 PKP3Q9Y446 797 aa19.47■□□□□ 0.71
ATG3-208ENST00000495756 TRPM6Q9BX84 2022 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 FAM237BA0A1B0GVD1 139 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 CCDC78A2IDD5 438 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 IGLON5A6NGN9 336 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 C10orf142B7Z368 130 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 STX7O15400 261 aaKnown RBP19.46■□□□□ 0.71
ATG3-208ENST00000495756 LZTS3O60299 673 aaPredicted RBP19.46■□□□□ 0.71
ATG3-208ENST00000495756 GM2AP17900 193 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 PPP2CBP62714 309 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 PPP2CAP67775 309 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 ACOX1Q15067 660 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 TSTD2Q5T7W7 516 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 ANKMY2Q8IV38 441 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 RAVER1Q8IY67 606 aaKnown RBP19.46■□□□□ 0.71
ATG3-208ENST00000495756 FBXO36Q8NEA4 188 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 OR4K2Q8NGD2 314 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 STYXQ8WUJ0 223 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 PEX13Q92968 403 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 DNAJC1Q96KC8 554 aaKnown RBP19.46■□□□□ 0.71
ATG3-208ENST00000495756 TRIM56Q9BRZ2 755 aaKnown RBP19.46■□□□□ 0.71
ATG3-208ENST00000495756 GPR174Q9BXC1 333 aa19.46■□□□□ 0.71
ATG3-208ENST00000495756 C1QTNF1Q9BXJ1 281 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms