RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PTRHD1Q6GMV3 140 aaKnown RBP13.47□□□□□ -0.25
GPC1-209ENST00000495100 TMEM214Q6NUQ4 689 aaKnown RBP13.47□□□□□ -0.25
GPC1-209ENST00000495100 PDSS2Q86YH6 399 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 AUTS2Q8WXX7 1259 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 C3orf30Q96M34 536 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 CCDC138Q96M89 665 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 MRPL57Q9BQC6 102 aaKnown RBP13.47□□□□□ -0.25
GPC1-209ENST00000495100 ENTPD7Q9NQZ7 604 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 OSER1Q9NX31 292 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 STK39Q9UEW8 545 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 USP3Q9Y6I4 520 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 CDH23Q9H251 3354 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 CD3EAPO15446 510 aaKnown RBP13.47□□□□□ -0.25
GPC1-209ENST00000495100 SERPINF2P08697 491 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 PURAQ00577 322 aaKnown RBP13.47□□□□□ -0.25
GPC1-209ENST00000495100 ATXN7L2Q5T6C5 722 aaPredicted RBP13.47□□□□□ -0.25
GPC1-209ENST00000495100 REP15Q6BDI9 236 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 TAF2Q6P1X5 1199 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 SIDT2Q8NBJ9 832 aaKnown RBP13.47□□□□□ -0.25
GPC1-209ENST00000495100 PBXIP1Q96AQ6 731 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 MRGPRX2Q96LB1 330 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 HGH1Q9BTY7 390 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 MYO10Q9HD67 2058 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 NDUFAF1Q9Y375 327 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 PKP3Q9Y446 797 aa13.47□□□□□ -0.25
GPC1-209ENST00000495100 MICAL3Q7RTP6 2002 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 NRP2O60462 931 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 CHEK2O96017 543 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 KCNK10P57789 538 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 CDC42EP1Q00587 391 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 TUBB3Q13509 450 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 IMPG1Q17R60 797 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 MRNIPQ6NTE8 343 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 IL27RAQ6UWB1 636 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 BBS5Q8N3I7 341 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 METTL6Q8TCB7 284 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 JADE3Q92613 823 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 MS4A4AQ96JQ5 239 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 GPR22Q99680 433 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 AKTIPQ9H8T0 292 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 VPS28Q9UK41 221 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 KRT87PA6NCN2 255 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 PRORSD1PA6NEY8 169 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 MYO1GB0I1T2 1018 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 F5H5T6 163 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 MATN3O15232 486 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 MAFKO60675 156 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 PQBP1O60828 265 aaKnown RBP13.46□□□□□ -0.25
GPC1-209ENST00000495100 PRKAR2AP13861 404 aaKnown RBP13.46□□□□□ -0.25
GPC1-209ENST00000495100 IL10P22301 178 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 MAGEA3P43357 314 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 DGKQP52824 942 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 SULT2A1Q06520 285 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 GALNT2Q10471 571 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 LBRQ14739 615 aaKnown RBP13.46□□□□□ -0.25
GPC1-209ENST00000495100 SIRPB2Q5JXA9 342 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 FAM151BQ6UXP7 276 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 LPCAT2Q7L5N7 544 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 ANKRD46Q86W74 232 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 CPNE9Q8IYJ1 553 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 LILRA2Q8N149 483 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 B4GALNT2Q8NHY0 566 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 SLC29A1Q99808 456 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 C17orf80Q9BSJ5 609 aa13.46□□□□□ -0.25
GPC1-209ENST00000495100 MTG1Q9BT17 334 aaPredicted RBP13.46□□□□□ -0.25
GPC1-209ENST00000495100 TDRKHQ9Y2W6 561 aaKnown RBP13.46□□□□□ -0.25
GPC1-209ENST00000495100 SF3B1O75533 1304 aaKnown RBP eCLIP13.46□□□□□ -0.26
GPC1-209ENST00000495100 SNAP91O60641 907 aa13.46□□□□□ -0.26
GPC1-209ENST00000495100 APOA4P06727 396 aa13.46□□□□□ -0.26
GPC1-209ENST00000495100 CRABP2P29373 138 aa13.46□□□□□ -0.26
GPC1-209ENST00000495100 HMOX2P30519 316 aa13.46□□□□□ -0.26
GPC1-209ENST00000495100 HARS2P49590 506 aaKnown RBP13.46□□□□□ -0.26
GPC1-209ENST00000495100 MTTPP55157 894 aa13.46□□□□□ -0.26
GPC1-209ENST00000495100 MTPNP58546 118 aa13.46□□□□□ -0.26
GPC1-209ENST00000495100 ARHGEF7Q14155 803 aa13.46□□□□□ -0.26
GPC1-209ENST00000495100 GRB14Q14449 540 aa13.46□□□□□ -0.26
GPC1-209ENST00000495100 PIWIL4Q7Z3Z4 852 aaKnown RBP13.46□□□□□ -0.26
GPC1-209ENST00000495100 STK32CQ86UX6 486 aa13.46□□□□□ -0.26
GPC1-209ENST00000495100 C19orf60Q96EN9 201 aa13.46□□□□□ -0.26
GPC1-209ENST00000495100 ZYG11BQ9C0D3 744 aa13.46□□□□□ -0.26
GPC1-209ENST00000495100 TLR9Q9NR96 1032 aa13.46□□□□□ -0.26
GPC1-209ENST00000495100 UBAP1Q9NZ09 502 aa13.46□□□□□ -0.26
GPC1-209ENST00000495100 EIF2B4Q9UI10 523 aaKnown RBP13.46□□□□□ -0.26
GPC1-209ENST00000495100 SDHDO14521 159 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 SLC2A4P14672 509 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 ESRRGP62508 458 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 GTF2H3Q13889 308 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 PIK3R6Q5UE93 754 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 CCDC81Q6ZN84 652 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 HS6ST3Q8IZP7 471 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 PCYOX1LQ8NBM8 494 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 CALML6Q8TD86 181 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 SPATA16Q9BXB7 569 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 DGCR6LQ9BY27 220 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 OCEL1Q9H607 264 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 TRMT6Q9UJA5 497 aaKnown RBP13.45□□□□□ -0.26
GPC1-209ENST00000495100 ALDH1A2O94788 518 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 ALPIP09923 528 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 GJA1P17302 382 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 CDK18Q07002 472 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms