RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 CBFA2T3O75081 653 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 CYP2A6P11509 494 aaPredicted RBP17.15■□□□□ 0.34
SNX17-209ENST00000494893 CSRP1P21291 193 aaKnown RBP17.15■□□□□ 0.34
SNX17-209ENST00000494893 EPHA8P29322 1005 aaPredicted RBP17.15■□□□□ 0.34
SNX17-209ENST00000494893 CETN2P41208 172 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 RPL26P61254 145 aaKnown RBP17.15■□□□□ 0.34
SNX17-209ENST00000494893 GALNT3Q14435 633 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 LRRC14Q15048 493 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 SLC14A2Q15849 920 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 GATAD2AQ86YP4 633 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 NAXDQ8IW45 347 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 SLC35B2Q8TB61 432 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 BAHD1Q8TBE0 780 aaPredicted RBP17.15■□□□□ 0.34
SNX17-209ENST00000494893 FAM174AQ8TBP5 190 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 ACTRT1Q8TDG2 376 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 SAP25Q8TEE9 199 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 MS4A14Q96JA4 679 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 CAPZA3Q96KX2 299 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 UBP1Q9NZI7 540 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 KLHL8Q9P2G9 620 aaPredicted RBP17.15■□□□□ 0.34
SNX17-209ENST00000494893 KLF15Q9UIH9 416 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 TTC7AQ9ULT0 858 aaPredicted RBP17.15■□□□□ 0.34
SNX17-209ENST00000494893 RPL26L1Q9UNX3 145 aaKnown RBP17.15■□□□□ 0.34
SNX17-209ENST00000494893 SPTY2D1-AS1A0A0U1RR47 76 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 K7ESM1 405 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 MAGEC1O60732 1142 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 C1SP09871 688 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 ETV3P41162 512 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 RABIFP47224 123 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 PTSQ03393 145 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 EIF2B5Q13144 721 aaKnown RBP17.14■□□□□ 0.33
SNX17-209ENST00000494893 PDE1CQ14123 709 aaPredicted RBP17.14■□□□□ 0.33
SNX17-209ENST00000494893 INPP5AQ14642 412 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 ACOX1Q15067 660 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 ZNF542PQ5EBM4 170 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 PPM1JQ5JR12 505 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 SEL1L2Q5TEA6 688 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 LRRC66Q68CR7 880 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 USP45Q70EL2 814 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 PID1Q7Z2X4 250 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 KDELC2Q7Z4H8 507 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 TECPR1Q7Z6L1 1165 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 SLC13A5Q86YT5 568 aaPredicted RBP17.14■□□□□ 0.33
SNX17-209ENST00000494893 CDKL3Q8IVW4 592 aaPredicted RBP17.14■□□□□ 0.33
SNX17-209ENST00000494893 FCRL5Q96RD9 977 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 LYSMD1Q96S90 227 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 VAT1Q99536 393 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 C1QTNF7Q9BXJ2 289 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 PCOLCE2Q9UKZ9 415 aa17.14■□□□□ 0.33
SNX17-209ENST00000494893 ANKRD66B4E2M5 251 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 PDE2AO00408 941 aaPredicted RBP17.13■□□□□ 0.33
SNX17-209ENST00000494893 DFNA5O60443 496 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 PMPCBO75439 489 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 PCCBP05166 539 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 CA4P22748 312 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 PAFAH1B1P43034 410 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 NOVA1P51513 510 aaKnown RBP17.13■□□□□ 0.33
SNX17-209ENST00000494893 STC1P52823 247 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 EPHB1P54762 984 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 CDK18Q07002 472 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 CKAP4Q07065 602 aaKnown RBP17.13■□□□□ 0.33
SNX17-209ENST00000494893 SIX1Q15475 284 aaPredicted RBP17.13■□□□□ 0.33
SNX17-209ENST00000494893 PCSK7Q16549 785 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 DENND2CQ68D51 928 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 KCTD16Q68DU8 428 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 PSAPL1Q6NUJ1 521 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 DARS2Q6PI48 645 aaKnown RBP17.13■□□□□ 0.33
SNX17-209ENST00000494893 Q6ZVL8 140 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 DCP2Q8IU60 420 aaKnown RBP17.13■□□□□ 0.33
SNX17-209ENST00000494893 ATG4AQ8WYN0 398 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 EID2BQ96D98 161 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 DTD2Q96FN9 168 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 MRGPRX2Q96LB1 330 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 TRHDEQ9UKU6 1024 aa17.13■□□□□ 0.33
SNX17-209ENST00000494893 PSMD11O00231 422 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 PGRMC1O00264 195 aaKnown RBP17.12■□□□□ 0.33
SNX17-209ENST00000494893 KCNN4O15554 427 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 SDC3O75056 442 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 CLDN7O95471 211 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 ATXN1LP0C7T5 689 aaKnown RBP17.12■□□□□ 0.33
SNX17-209ENST00000494893 PIRTP0C851 137 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 GDF10P55107 478 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 WNT3AP56704 352 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 YPEL5P62699 121 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 MTM1Q13496 603 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 ANKRD20A2Q5SQ80 823 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 ANKRD20A1Q5TYW2 823 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 ANKRD20A3Q5VUR7 823 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 ESRP1Q6NXG1 681 aaKnown RBP17.12■□□□□ 0.33
SNX17-209ENST00000494893 ZNF572Q7Z3I7 529 aaPredicted RBP17.12■□□□□ 0.33
SNX17-209ENST00000494893 SLC25A45Q8N413 288 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 OXR1Q8N573 874 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 CEP112Q8N8E3 955 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 TTC13Q8NBP0 860 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 CCDC110Q8TBZ0 833 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 NUS1Q96E22 293 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 APOOQ9BUR5 198 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 MLPHQ9BV36 600 aaPredicted RBP17.12■□□□□ 0.33
SNX17-209ENST00000494893 GBA3Q9H227 469 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 TCEAL2Q9H3H9 227 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms