RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 KANSL1Q7Z3B3 1105 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 ADAT2Q7Z6V5 191 aaKnown RBP8.81□□□□□ -1
ITGB1-217ENST00000494395 SYCE1Q8N0S2 351 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 SLC22A18ASQ8N1D0 253 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 CBARPQ8N350 705 aaPredicted RBP8.81□□□□□ -1
ITGB1-217ENST00000494395 TP53I13Q8NBR0 393 aaPredicted RBP8.81□□□□□ -1
ITGB1-217ENST00000494395 CCNYQ8ND76 341 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 OR13H1Q8NG92 308 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 PIH1D2Q8WWB5 315 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 PDLIM2Q96JY6 352 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 MCCC1Q96RQ3 725 aaPredicted RBP8.81□□□□□ -1
ITGB1-217ENST00000494395 MYOCQ99972 504 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 SEMA3CQ99985 751 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 MAK16Q9BXY0 300 aaKnown RBP8.81□□□□□ -1
ITGB1-217ENST00000494395 OSBPL8Q9BZF1 889 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 TSGA10Q9BZW7 698 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 TM7SF3Q9NS93 570 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 DCTN4Q9UJW0 460 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 AMFRQ9UKV5 643 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 PCDHGB2Q9Y5G2 931 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 HS3ST3A1Q9Y663 406 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 SCN8AQ9UQD0 1980 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 TDRD6O60522 2096 aaKnown RBP8.81□□□□□ -1
ITGB1-217ENST00000494395 CNOT1A5YKK6 2376 aaKnown RBP8.8□□□□□ -1
ITGB1-217ENST00000494395 A0A1B0GTQ1 180 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 A0A1W2PQ67 120 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 MIF4GDA9UHW6 222 aaKnown RBP8.8□□□□□ -1
ITGB1-217ENST00000494395 APOC4-APOC2K7ER74 178 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 NEMP1O14524 444 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 KCNK3O14649 394 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 PCDHGA12O60330 932 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 DFNA5O60443 496 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 CBFA2T3O75081 653 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 TM7SF2O76062 418 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 CPP00450 1065 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 APOC2P02655 101 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 C6P13671 934 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 LHCGRP22888 699 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 CES1P23141 567 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 PTPN3P26045 913 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 EIF1AXP47813 144 aaKnown RBP8.8□□□□□ -1
ITGB1-217ENST00000494395 RXRGP48443 463 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 LIG3P49916 1009 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 ATXN3P54252 364 aaPredicted RBP8.8□□□□□ -1
ITGB1-217ENST00000494395 NAP1L1P55209 391 aaKnown RBP8.8□□□□□ -1
ITGB1-217ENST00000494395 C21orf59P57076 290 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 AP1B1Q10567 949 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 WASHC5Q12768 1159 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 POU4F2Q12837 409 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 KLF1Q13351 362 aaPredicted RBP8.8□□□□□ -1
ITGB1-217ENST00000494395 STAT4Q14765 748 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 PTPRRQ15256 657 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 SLC14A2Q15849 920 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 WSCD2Q2TBF2 565 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 C11orf91Q3C1V1 193 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 UAP1L1Q3KQV9 507 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 TEX44Q53QW1 395 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 ODF2Q5BJF6 829 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 TPRG1LQ5T0D9 272 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 KDM7AQ6ZMT4 941 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 PEX26Q7Z412 305 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 CCDC50Q8IVM0 306 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 BAHD1Q8TBE0 780 aaPredicted RBP8.8□□□□□ -1
ITGB1-217ENST00000494395 CXorf40AQ8TE69 158 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 P3H4Q92791 437 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 HAUS1Q96CS2 278 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 IMP4Q96G21 291 aaKnown RBP8.8□□□□□ -1
ITGB1-217ENST00000494395 COQ10AQ96MF6 247 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 QKIQ96PU8 341 aaKnown RBP eCLIP8.8□□□□□ -1
ITGB1-217ENST00000494395 TRIB3Q96RU7 358 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 ELF4Q99607 663 aaPredicted RBP8.8□□□□□ -1
ITGB1-217ENST00000494395 WRAP53Q9BUR4 548 aaKnown RBP8.8□□□□□ -1
ITGB1-217ENST00000494395 HEMGNQ9BXL5 484 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 TDRD1Q9BXT4 1180 aaKnown RBP8.8□□□□□ -1
ITGB1-217ENST00000494395 ERVMER34-1Q9H9K5 563 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 GDF3Q9NR23 364 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 MBNL1Q9NR56 388 aaKnown RBP8.8□□□□□ -1
ITGB1-217ENST00000494395 B4GALT6Q9UBX8 382 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 PHTF1Q9UMS5 762 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 GUCA1BQ9UMX6 200 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 COQ6Q9Y2Z9 468 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 RAI2Q9Y5P3 530 aa8.8□□□□□ -1
ITGB1-217ENST00000494395 NPIPB15A6NHN6 443 aaPredicted RBP8.79□□□□□ -1
ITGB1-217ENST00000494395 A6NNZ2 444 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 HACD1B0YJ81 288 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 GIPC1O14908 333 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 MAGEC1O60732 1142 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 HEXIM1O94992 359 aaKnown RBP8.79□□□□□ -1
ITGB1-217ENST00000494395 KCNK5O95279 499 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 CCDC175P0C221 793 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 THEGLP0DJG4 465 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 XPAP23025 273 aaPredicted RBP8.79□□□□□ -1
ITGB1-217ENST00000494395 CD68P34810 354 aaPredicted RBP8.79□□□□□ -1
ITGB1-217ENST00000494395 SMCPP49901 116 aaPredicted RBP8.79□□□□□ -1
ITGB1-217ENST00000494395 CCT8P50990 548 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 POLR2LP62875 67 aaKnown RBP8.79□□□□□ -1
ITGB1-217ENST00000494395 OTUD4Q01804 1114 aaKnown RBP8.79□□□□□ -1
ITGB1-217ENST00000494395 SEMG2Q02383 582 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 SGCGQ13326 291 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 XRCC4Q13426 336 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms