RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CER1O95813 267 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 ITGAVP06756 1048 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 C1SP09871 688 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 CHRNA4P43681 627 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 RABIFP47224 123 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 PRPSAP1Q14558 356 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 INPP5AQ14642 412 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 ZNF423Q2M1K9 1284 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 P3H1Q32P28 736 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 UAP1L1Q3KQV9 507 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 CCDC70Q6NSX1 233 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 ARHGEF18Q6ZSZ5 1173 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 Q6ZVL8 140 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 PTAR1Q7Z6K3 402 aaPredicted RBP13.55□□□□□ -0.24
COL1A1-208ENST00000494334 KLHDC8BQ8IXV7 354 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 SLC25A41Q8N5S1 370 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 PRELID2Q8N945 189 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 PLA2G15Q8NCC3 412 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 ACTRT1Q8TDG2 376 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 DTD2Q96FN9 168 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 ELF4Q99607 663 aaPredicted RBP13.55□□□□□ -0.24
COL1A1-208ENST00000494334 ERVMER34-1Q9H9K5 563 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 MAGEE1Q9HCI5 957 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 SMARCAL1Q9NZC9 954 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 FNDC3AQ9Y2H6 1198 aaKnown RBP13.55□□□□□ -0.24
COL1A1-208ENST00000494334 CACNA1EQ15878 2313 aa13.55□□□□□ -0.24
COL1A1-208ENST00000494334 C1orf232A0A0U1RR37 186 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 CES2O00748 559 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 SLC30A4O14863 429 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 ZNF185O15231 689 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 FANCGO15287 622 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 AGTP01019 485 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 IFNB1P01574 187 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 PCCBP05166 539 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 PIRTP0C851 137 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 ETS1P14921 441 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 TCP1P17987 556 aaKnown RBP13.54□□□□□ -0.24
COL1A1-208ENST00000494334 HLA-DPA1P20036 260 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 ADRA1AP35348 466 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 KCNJ1P48048 391 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 STC1P52823 247 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 YPEL5P62699 121 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 OLIG2Q13516 323 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 PDE1CQ14123 709 aaPredicted RBP13.54□□□□□ -0.24
COL1A1-208ENST00000494334 SLC1A5Q15758 541 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 SIRPB2Q5JXA9 342 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 TPRG1LQ5T0D9 272 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 PAPD7Q5XG87 772 aaKnown RBP13.54□□□□□ -0.24
COL1A1-208ENST00000494334 RANBP10Q6VN20 620 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 RFLNAQ6ZTI6 216 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 PRUNE1Q86TP1 453 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 DCP2Q8IU60 420 aaKnown RBP13.54□□□□□ -0.24
COL1A1-208ENST00000494334 PELI3Q8N2H9 469 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 GLIS1Q8NBF1 620 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 EID2BQ96D98 161 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 NUS1Q96E22 293 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 NAPGQ99747 312 aaPredicted RBP13.54□□□□□ -0.24
COL1A1-208ENST00000494334 FICDQ9BVA6 458 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 FSD1LQ9BXM9 530 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 AP1M1Q9BXS5 423 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 ZFYVE1Q9HBF4 777 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 TM7SF3Q9NS93 570 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 HOMER3Q9NSC5 361 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 KCTD5Q9NXV2 234 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 CDV3Q9UKY7 258 aaKnown RBP13.54□□□□□ -0.24
COL1A1-208ENST00000494334 SHOC2Q9UQ13 582 aa13.54□□□□□ -0.24
COL1A1-208ENST00000494334 KNL1Q8NG31 2342 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 ADAMTS9Q9P2N4 1935 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 SPTY2D1-AS1A0A0U1RR47 76 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 A0A1B0GTQ1 180 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 PGRMC1O00264 195 aaKnown RBP13.53□□□□□ -0.24
COL1A1-208ENST00000494334 TOR1BO14657 336 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 TM4SF5O14894 197 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 DFNA5O60443 496 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 ZNF883P0CG24 379 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 TRIM23P36406 574 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 TNNT3P45378 269 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-208ENST00000494334 MTM1Q13496 603 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 SPARCL1Q14515 664 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 SHBQ15464 509 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 FAXCQ5TGI0 409 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 KCTD11Q693B1 232 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 ESRP1Q6NXG1 681 aaKnown RBP13.53□□□□□ -0.24
COL1A1-208ENST00000494334 PNCKQ6P2M8 343 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 LYSMD3Q7Z3D4 306 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 TMC3Q7Z5M5 1100 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 RAVER1Q8IY67 606 aaKnown RBP13.53□□□□□ -0.24
COL1A1-208ENST00000494334 TAB3Q8N5C8 712 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-208ENST00000494334 CCHCR1Q8TD31 782 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 SCAMP4Q969E2 229 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 PPP1R2P1Q96PQ5 205 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 NAP1L3Q99457 506 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-208ENST00000494334 APOL2Q9BQE5 337 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 APOOQ9BUR5 198 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 ABCG8Q9H221 673 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 DLL3Q9NYJ7 618 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 CD84Q9UIB8 345 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 ZNF711Q9Y462 761 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 OR1A2Q9Y585 309 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 SPO11Q9Y5K1 396 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms