RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PDE6CP51160 858 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 CDH8P55286 799 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 KRTAP10-2P60368 255 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 NOP14P78316 857 aaKnown RBP5.42□□□□□ -1.54
PTCD3-219ENST00000494323 ZNF33AQ06730 810 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 SEMA3BQ13214 749 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 MTM1Q13496 603 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 BYSLQ13895 437 aaKnown RBP5.42□□□□□ -1.54
PTCD3-219ENST00000494323 MAPRE1Q15691 268 aaKnown RBP5.42□□□□□ -1.54
PTCD3-219ENST00000494323 DUOXA1Q1HG43 343 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 GRAMD1BQ3KR37 738 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 EOGTQ5NDL2 527 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 FAM173BQ6P4H8 233 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 TRAPPC11Q7Z392 1133 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 LIMS2Q7Z4I7 341 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 PIP4P1Q86T03 277 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 CIR1Q86X95 450 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-219ENST00000494323 TMEM25Q86YD3 366 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 FAM186BQ8IYM0 893 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 GPD1LQ8N335 351 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 HDDC3Q8N4P3 179 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 MINDY1Q8N5J2 469 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 PDILTQ8N807 584 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 C3orf20Q8ND61 904 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 SCAMP5Q8TAC9 235 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 CCDC127Q96BQ5 260 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 HVCN1Q96D96 273 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 ANKRD36BP1Q96IX9 119 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 CAMK1GQ96NX5 476 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 GNRHR2Q96P88 292 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 SLITRK1Q96PX8 696 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 OR14A2Q96R54 314 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 ACOX2Q99424 681 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 TBCBQ99426 244 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 ZNF518BQ9C0D4 1074 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 DPEP3Q9H4B8 488 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 LDAHQ9H6V9 325 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 PLCB1Q9NQ66 1216 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 PLA2G3Q9NZ20 509 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 TBC1D14Q9P2M4 693 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 SEL1LQ9UBV2 794 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 DMTF1Q9Y222 760 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 PCDHA3Q9Y5H8 950 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 SLC30A1Q9Y6M5 507 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 SPEGQ15772 3267 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 NBEAQ8NFP9 2946 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 APC2O95996 2303 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 HELZP42694 1942 aaKnown RBP5.41□□□□□ -1.54
PTCD3-219ENST00000494323 PLXNB3Q9ULL4 1909 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 VPS37CA5D8V6 355 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-219ENST00000494323 CFAP69A5D8W1 941 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 TMEM8BA6NDV4 472 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 A8MXQ7 604 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 B5MCH6 92 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 WASH3PC4AMC7 463 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 MYO1FO00160 1098 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 CLIC2O15247 247 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 AP5Z1O43299 807 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 SH3BP5O60239 455 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 TULP3O75386 442 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 OLFM2O95897 454 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 TBX18O95935 607 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 BMP15O95972 392 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 OAS1P00973 400 aaKnown RBP5.41□□□□□ -1.54
PTCD3-219ENST00000494323 SERPINF2P08697 491 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 IRF1P10914 325 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 MYF5P13349 255 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 CD59P13987 128 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 GABRG2P18507 467 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 TNNI1P19237 187 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 MALP21145 153 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 FPR1P21462 350 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 RDXP35241 583 aaKnown RBP5.41□□□□□ -1.54
PTCD3-219ENST00000494323 PPP3CCP48454 512 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 CTXN1P60606 82 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 MYL6P60660 151 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 GAD2Q05329 585 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 RABEP1Q15276 862 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 TRIP6Q15654 476 aaKnown RBP5.41□□□□□ -1.54
PTCD3-219ENST00000494323 KHDC1Q4VXA5 237 aaKnown RBP5.41□□□□□ -1.54
PTCD3-219ENST00000494323 SPDYCQ5MJ68 293 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 FKBP15Q5T1M5 1219 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 C10orf76Q5T2E6 689 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 HECTD3Q5T447 861 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 TPGS1Q6ZTW0 290 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 BBS7Q8IWZ6 715 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 NUP93Q8N1F7 819 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 DCBLD1Q8N8Z6 715 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 TRIML1Q8N9V2 468 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 FBXO32Q969P5 355 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 APIPQ96GX9 242 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 TNIP3Q96KP6 325 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 MRGPRX1Q96LB2 322 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 VRK1Q99986 396 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-219ENST00000494323 MED10Q9BTT4 135 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 TTLL2Q9BWV7 592 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 NUP62CLQ9H1M0 184 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 CD93Q9NPY3 652 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 EHD2Q9NZN4 543 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 DEC1Q9P2X7 70 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms