RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 AP5B1Q2VPB7 878 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 ZIK1Q3SY52 487 aaPredicted RBP19.18■□□□□ 0.66
COL27A1-207ENST00000494090 SPESP1Q6UW49 350 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 PLD5Q8N7P1 536 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 TTPALQ9BTX7 342 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 HSD3B7Q9H2F3 369 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 ZNF180Q9UJW8 692 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 GMPPBQ9Y5P6 360 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 FFAR3O14843 346 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 GPR42O15529 346 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 MGRN1O60291 552 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 ADRA1BP35368 520 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 ATP12AP54707 1039 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 PRAMEF19Q5SWL8 479 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 TLCD1Q96CP7 247 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 FCRL2Q96LA5 508 aaPredicted RBP19.18■□□□□ 0.66
COL27A1-207ENST00000494090 BPIFA1Q9NP55 256 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 DNAJC28Q9NX36 388 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 TBC1D14Q9P2M4 693 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 TRAF6Q9Y4K3 522 aa19.18■□□□□ 0.66
COL27A1-207ENST00000494090 ABLIM1O14639 778 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 MAXP61244 160 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 ENPEPQ07075 957 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 TEX44Q53QW1 395 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 NIFKQ9BYG3 293 aaKnown RBP19.17■□□□□ 0.66
COL27A1-207ENST00000494090 POLR1BQ9H9Y6 1135 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 C2P06681 752 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 LINC00032P0C843 101 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 PRKAG1P54619 331 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 CCL23P55773 120 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 XKR6Q5GH73 641 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 NOL9Q5SY16 702 aaKnown RBP19.17■□□□□ 0.66
COL27A1-207ENST00000494090 CERCAMQ5T4B2 595 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 TMC5Q6UXY8 1006 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 KIAA0408Q6ZU52 694 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 KRT74Q7RTS7 529 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 CUZD1Q86UP6 607 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 GPR20Q99678 358 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 HOPXQ9BPY8 73 aaPredicted RBP19.17■□□□□ 0.66
COL27A1-207ENST00000494090 NUAK2Q9H093 628 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 AASDHPPTQ9NRN7 309 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 TRIM40Q6P9F5 258 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 ZNF671Q8TAW3 534 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 COL26A1Q96A83 441 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 NMUR2Q9GZQ4 415 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 BRD9Q9H8M2 597 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 STON1Q9Y6Q2 735 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 PTGIRP43119 386 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 KLF10Q13118 480 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 ITGADQ13349 1161 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 RNASEH2BQ5TBB1 312 aaKnown RBP19.17■□□□□ 0.66
COL27A1-207ENST00000494090 DET1Q7L5Y6 550 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 AMIGO2Q86SJ2 522 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 PEG10Q86TG7 708 aaKnown RBP19.17■□□□□ 0.66
COL27A1-207ENST00000494090 PQLC1Q8N2U9 271 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 LPPQ93052 612 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 ZFP14Q9HCL3 533 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 CLN6Q9NWW5 311 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 CLIC5Q9NZA1 410 aa19.17■□□□□ 0.66
COL27A1-207ENST00000494090 RPTORQ8N122 1335 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 SERPINB7O75635 380 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 IDH2P48735 452 aaKnown RBP19.16■□□□□ 0.66
COL27A1-207ENST00000494090 DGKZQ13574 1117 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 GPR180Q86V85 440 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 TDRPQ86YL5 185 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 RASAL3Q86YV0 1011 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 QKIQ96PU8 341 aaKnown RBP eCLIP19.16■□□□□ 0.661e-9■■■□□ 14.6
COL27A1-207ENST00000494090 CLK4Q9HAZ1 481 aaKnown RBP19.16■□□□□ 0.66
COL27A1-207ENST00000494090 S100A14Q9HCY8 104 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 PSMD13Q9UNM6 376 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 TRIM43BA6NCK2 446 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 DPYSQ14117 519 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 ARMC3Q5W041 872 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 ARMC8Q8IUR7 673 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 TCAIMQ8N3R3 496 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 MYDGFQ969H8 173 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 B3GNT5Q9BYG0 378 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 RSL24D1Q9UHA3 163 aaKnown RBP19.16■□□□□ 0.66
COL27A1-207ENST00000494090 ATP6AP2A0A1C7CYW4 349 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 ATP6AP2O75787 350 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 CST1P01037 141 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 HLA-DQA2P01906 255 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 NTRK1P04629 796 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 NR2F1P10589 423 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 EPORP19235 508 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 NDUFAF6Q330K2 333 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 RBM44Q6ZP01 1051 aaKnown RBP19.16■□□□□ 0.66
COL27A1-207ENST00000494090 CYP4X1Q8N118 509 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 CCDC28BQ9BUN5 200 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 GRM6O15303 877 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 TEX28O15482 410 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 TM7SF2O76062 418 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 CST3P01034 146 aaPredicted RBP19.16■□□□□ 0.66
COL27A1-207ENST00000494090 ARL2P36404 184 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 GLUD2P49448 558 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 SPIRE1Q08AE8 756 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 FAM110CQ1W6H9 321 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 OFCC1Q8IZS5 231 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 KCTD15Q96SI1 283 aaPredicted RBP19.16■□□□□ 0.66
COL27A1-207ENST00000494090 NOL6Q9H6R4 1146 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms