RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 SLC45A3Q96JT2 553 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 TEFMQ96QE5 360 aaKnown RBP17.69■□□□□ 0.42
NUP50-218ENST00000493456 SELENOOQ9BVL4 669 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 LRRC19Q9H756 370 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 PHPT1Q9NRX4 125 aaPredicted RBP17.69■□□□□ 0.42
NUP50-218ENST00000493456 KCTD5Q9NXV2 234 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 B4E171 279 aa17.68■□□□□ 0.42
NUP50-218ENST00000493456 J3KR12 359 aa17.68■□□□□ 0.42
NUP50-218ENST00000493456 TEX33O43247 280 aa17.68■□□□□ 0.42
NUP50-218ENST00000493456 RFC1P35251 1148 aaPredicted RBP17.68■□□□□ 0.42
NUP50-218ENST00000493456 TSPAN7P41732 249 aa17.68■□□□□ 0.42
NUP50-218ENST00000493456 NDST2P52849 883 aa17.68■□□□□ 0.42
NUP50-218ENST00000493456 FMO1Q01740 532 aa17.68■□□□□ 0.42
NUP50-218ENST00000493456 IGFBP7Q16270 282 aa17.68■□□□□ 0.42
NUP50-218ENST00000493456 DCAF12Q5T6F0 453 aa17.68■□□□□ 0.42
NUP50-218ENST00000493456 PAF1Q8N7H5 531 aa17.68■□□□□ 0.42
NUP50-218ENST00000493456 SLC30A5Q8TAD4 765 aa17.68■□□□□ 0.42
NUP50-218ENST00000493456 EFHD1Q9BUP0 239 aa17.68■□□□□ 0.42
NUP50-218ENST00000493456 SLC39A1Q9NY26 324 aa17.68■□□□□ 0.42
NUP50-218ENST00000493456 FZD10Q9ULW2 581 aa17.68■□□□□ 0.42
NUP50-218ENST00000493456 MAN2B2Q9Y2E5 1009 aa17.68■□□□□ 0.42
NUP50-218ENST00000493456 ARHGEF17Q96PE2 2063 aaPredicted RBP17.68■□□□□ 0.42
NUP50-218ENST00000493456 ZFC3H1O60293 1989 aaKnown RBP17.68■□□□□ 0.42
NUP50-218ENST00000493456 IGHV1OR21-1A0A087WYE8 117 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 PES1O00541 588 aaKnown RBP17.67■□□□□ 0.42
NUP50-218ENST00000493456 PALMO75781 387 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 CEACAM5P06731 702 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 ERCC5P28715 1186 aaPredicted RBP17.67■□□□□ 0.42
NUP50-218ENST00000493456 NSFP46459 744 aaKnown RBP17.67■□□□□ 0.42
NUP50-218ENST00000493456 RGRP47804 291 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 GPLD1P80108 840 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 PTP4A2Q12974 167 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 NCAPHQ15003 741 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 ACOX1Q15067 660 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 SCYL2Q6P3W7 929 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 WDR59Q6PJI9 974 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 PELI3Q8N2H9 469 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 TSEN2Q8NCE0 465 aaKnown RBP17.67■□□□□ 0.42
NUP50-218ENST00000493456 C3orf20Q8ND61 904 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 KIAA1143Q96AT1 154 aaPredicted RBP17.67■□□□□ 0.42
NUP50-218ENST00000493456 NUS1Q96E22 293 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 CINPQ9BW66 212 aaPredicted RBP17.67■□□□□ 0.42
NUP50-218ENST00000493456 TEX101Q9BY14 249 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 FRMD8Q9BZ67 464 aaPredicted RBP17.67■□□□□ 0.42
NUP50-218ENST00000493456 NBASA2RRP1 2371 aa17.67■□□□□ 0.42
NUP50-218ENST00000493456 USP9XQ93008 2570 aaPredicted RBP17.67■□□□□ 0.42
NUP50-218ENST00000493456 ARHGAP42A6NI28 874 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 CCP110O43303 1012 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 GADD45BO75293 160 aaPredicted RBP17.66■□□□□ 0.42
NUP50-218ENST00000493456 GFPT2O94808 682 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 CALB1P05937 261 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 UNGP13051 313 aaPredicted RBP17.66■□□□□ 0.42
NUP50-218ENST00000493456 MAP4P27816 1152 aaKnown RBP17.66■□□□□ 0.42
NUP50-218ENST00000493456 CSF2RBP32927 897 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 MAN1A1P33908 653 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 GNPDA1P46926 289 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 ZNF143P52747 638 aaPredicted RBP17.66■□□□□ 0.42
NUP50-218ENST00000493456 TPI1P60174 286 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 NSUN2Q08J23 767 aaKnown RBP eCLIP17.66■□□□□ 0.42
NUP50-218ENST00000493456 CDC20Q12834 499 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 SLC30A9Q6PML9 568 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 HEATR4Q86WZ0 1026 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 FAM129CQ86XR2 697 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 NAGSQ8N159 534 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 SPOCK2Q92563 424 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 COQ10AQ96MF6 247 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 SUDS3Q9H7L9 328 aaPredicted RBP17.66■□□□□ 0.42
NUP50-218ENST00000493456 GPN2Q9H9Y4 310 aaPredicted RBP17.66■□□□□ 0.42
NUP50-218ENST00000493456 ZNF71Q9NQZ8 489 aaPredicted RBP17.66■□□□□ 0.42
NUP50-218ENST00000493456 ADAM22Q9P0K1 906 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 PILRAQ9UKJ1 303 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 SUFUQ9UMX1 484 aa17.66■□□□□ 0.42
NUP50-218ENST00000493456 ANKRD62A6NC57 917 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 SIGLEC16A6NMB1 481 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 EFCAB7A8K855 629 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 TRAFD1O14545 582 aaPredicted RBP17.65■□□□□ 0.42
NUP50-218ENST00000493456 CHRNB2P17787 502 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 AK4P27144 223 aaPredicted RBP17.65■□□□□ 0.42
NUP50-218ENST00000493456 AP1S1P61966 158 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 CDK3Q00526 305 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 RFTN1Q14699 578 aaPredicted RBP17.65■□□□□ 0.42
NUP50-218ENST00000493456 NKAIN2Q5VXU1 208 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 TMEM71Q6P5X7 295 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 NLGN4XQ8N0W4 816 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 NLGN4YQ8NFZ3 816 aaPredicted RBP17.65■□□□□ 0.42
NUP50-218ENST00000493456 APOBEC4Q8WW27 367 aaKnown RBP17.65■□□□□ 0.42
NUP50-218ENST00000493456 PSMG3-AS1Q96PY0 264 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 ZPBPQ9BS86 351 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 ZMYND15Q9H091 742 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 OCIAD1Q9NX40 245 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 KCNK4Q9NYG8 393 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 B4GALT6Q9UBX8 382 aa17.65■□□□□ 0.42
NUP50-218ENST00000493456 A0A1W2PQ67 120 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 PPM1DO15297 605 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 NKX2-8O15522 239 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 FUCA1P04066 466 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 IVLP07476 585 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 DESP17661 470 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 NFKBIAP25963 317 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 TEAD1P28347 426 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms