RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ERVMER34-1Q9H9K5 563 aa13.98□□□□□ -0.17
CCM2-217ENST00000492883 ZFYVE1Q9HBF4 777 aa13.98□□□□□ -0.17
CCM2-217ENST00000492883 MAGEE1Q9HCI5 957 aa13.98□□□□□ -0.17
CCM2-217ENST00000492883 KCND1Q9NSA2 647 aa13.98□□□□□ -0.17
CCM2-217ENST00000492883 DNAAF2Q9NVR5 837 aaKnown RBP13.98□□□□□ -0.17
CCM2-217ENST00000492883 TTC7AQ9ULT0 858 aaPredicted RBP13.98□□□□□ -0.17
CCM2-217ENST00000492883 DRG1Q9Y295 367 aaKnown RBP13.98□□□□□ -0.17
CCM2-217ENST00000492883 CTAGE9A4FU28 777 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 PGRMC1O00264 195 aaKnown RBP13.97□□□□□ -0.17
CCM2-217ENST00000492883 CES2O00748 559 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 TOR1BO14657 336 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 SLC30A4O14863 429 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 ZNF185O15231 689 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 METTL18O95568 372 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 AGTP01019 485 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 GM2AP17900 193 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 HLA-DPA1P20036 260 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 CHRNA4P43681 627 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 ARRB1P49407 418 aaPredicted RBP13.97□□□□□ -0.17
CCM2-217ENST00000492883 STC1P52823 247 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 THOP1P52888 689 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 YPEL5P62699 121 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 PTK2BQ14289 1009 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 SUZ12Q15022 739 aaKnown RBP13.97□□□□□ -0.17
CCM2-217ENST00000492883 SLC1A5Q15758 541 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 ZNF423Q2M1K9 1284 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 SIRPB2Q5JXA9 342 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 FAXCQ5TGI0 409 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 KDM7AQ6ZMT4 941 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 LYSMD3Q7Z3D4 306 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 TECPR1Q7Z6L1 1165 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 OXR1Q8N573 874 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 PRELID2Q8N945 189 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 ACTRT1Q8TDG2 376 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 RTP4Q96DX8 246 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 DTD2Q96FN9 168 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 NAPGQ99747 312 aaPredicted RBP13.97□□□□□ -0.17
CCM2-217ENST00000492883 AP1M1Q9BXS5 423 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 GPR63Q9BZJ6 419 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 TM7SF3Q9NS93 570 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 SHOC2Q9UQ13 582 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 FNDC3AQ9Y2H6 1198 aaKnown RBP13.97□□□□□ -0.17
CCM2-217ENST00000492883 GPR179Q6PRD1 2367 aa13.97□□□□□ -0.17
CCM2-217ENST00000492883 A0A1B0GTQ1 180 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 PSMD3O43242 534 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 SLC4A1P02730 911 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 FGF1P05230 155 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 C1SP09871 688 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 ATXN1LP0C7T5 689 aaKnown RBP13.96□□□□□ -0.17
CCM2-217ENST00000492883 ETS1P14921 441 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 HTR1BP28222 390 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 KCNJ1P48048 391 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 CCT8P50990 548 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 IL9RQ01113 521 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 SLC14A1Q13336 389 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 MTM1Q13496 603 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 SPARCL1Q14515 664 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 CDKN3Q16667 212 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 PNCKQ6P2M8 343 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 RFLNAQ6ZTI6 216 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 PRUNE1Q86TP1 453 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 NRSN1Q8IZ57 195 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 SLC22A18ASQ8N1D0 253 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 PLA2G15Q8NCC3 412 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 MAGOHBQ96A72 148 aaKnown RBP13.96□□□□□ -0.17
CCM2-217ENST00000492883 AP2M1Q96CW1 435 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 APOL2Q9BQE5 337 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 GORASP1Q9BQQ3 440 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 RTKNQ9BST9 563 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 APOOQ9BUR5 198 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 SMARCAL1Q9NZC9 954 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 PKD2L2Q9NZM6 624 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 CD84Q9UIB8 345 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 ZNF711Q9Y462 761 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 OR1A2Q9Y585 309 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 SAR1BQ9Y6B6 198 aa13.96□□□□□ -0.17
CCM2-217ENST00000492883 NUMA1Q14980 2115 aa13.96□□□□□ -0.18
CCM2-217ENST00000492883 GOLGA6L10A0A0M3HER8 536 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 SPTY2D1-AS1A0A0U1RR47 76 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 E7EVH7 732 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 ZNF883P0CG24 379 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 GPR1P46091 355 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 SPINT3P49223 89 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 LMAN1P49257 510 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 ZNF542PQ5EBM4 170 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 PAPD7Q5XG87 772 aaKnown RBP13.95□□□□□ -0.18
CCM2-217ENST00000492883 RAET1GQ6H3X3 334 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 ESRP1Q6NXG1 681 aaKnown RBP13.95□□□□□ -0.18
CCM2-217ENST00000492883 RANBP10Q6VN20 620 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 TMC3Q7Z5M5 1100 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 RAVER1Q8IY67 606 aaKnown RBP13.95□□□□□ -0.18
CCM2-217ENST00000492883 PDCD7Q8N8D1 485 aaKnown RBP13.95□□□□□ -0.18
CCM2-217ENST00000492883 ATL2Q8NHH9 583 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 BLOC1S5Q8TDH9 187 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 SCAMP4Q969E2 229 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 TRIM44Q96DX7 344 aaPredicted RBP13.95□□□□□ -0.18
CCM2-217ENST00000492883 TBL1YQ9BQ87 522 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 ABCG8Q9H221 673 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 FAM83DQ9H4H8 585 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 TRABDQ9H4I3 376 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms