RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 ALDH4A1P30038 563 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 CSF2RBP32927 897 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 CDH5P33151 784 aaPredicted RBP15.27■□□□□ 0.04
EPHB4-209ENST00000492878 MMP12P39900 470 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 GABRB2P47870 512 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 LIG3P49916 1009 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 RAD51Q06609 339 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 NFKBIBQ15653 356 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 UGP2Q16851 508 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 DEFB109BQ30KR1 87 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 INO80DQ53TQ3 878 aaPredicted RBP15.27■□□□□ 0.04
EPHB4-209ENST00000492878 DCAF12Q5T6F0 453 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 TRNP1Q6NT89 227 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 LEKR1Q6ZMV7 388 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 ZNF677Q86XU0 584 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 NLGN4XQ8N0W4 816 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 NLGN4YQ8NFZ3 816 aaPredicted RBP15.27■□□□□ 0.04
EPHB4-209ENST00000492878 CASKIN2Q8WXE0 1202 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 RTP4Q96DX8 246 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 HMCESQ96FZ2 354 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 SYNCQ9H7C4 482 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 PCDH12Q9NPG4 1184 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 TMEM248Q9NWD8 314 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 CUEDC1Q9NWM3 386 aaPredicted RBP15.27■□□□□ 0.04
EPHB4-209ENST00000492878 KCNMB2Q9Y691 235 aa15.27■□□□□ 0.04
EPHB4-209ENST00000492878 MED13Q9UHV7 2174 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 A0A1B0GTH6 734 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 ZSCAN5CA6NGD5 496 aaPredicted RBP15.26■□□□□ 0.03
EPHB4-209ENST00000492878 RHPN2P1A8MT19 583 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 CACNB4O00305 520 aaPredicted RBP15.26■□□□□ 0.03
EPHB4-209ENST00000492878 ZW10O43264 779 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 LSM8O95777 96 aaKnown RBP15.26■□□□□ 0.03
EPHB4-209ENST00000492878 IGSF6O95976 241 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 PRKCGP05129 697 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 MMEP08473 750 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 CCNB1P14635 433 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 RHOQP17081 205 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 NR1D1P20393 614 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 KELP23276 732 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 CSTF2P33240 577 aaKnown RBP eCLIP15.26■□□□□ 0.03
EPHB4-209ENST00000492878 FLT3P36888 993 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 RNASE9P60153 205 aaKnown RBP15.26■□□□□ 0.03
EPHB4-209ENST00000492878 MC1RQ01726 317 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 ABHD18Q0P651 414 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 SEPT6Q14141 434 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 ANKS6Q68DC2 871 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 TIPARPQ7Z3E1 657 aaKnown RBP15.26■□□□□ 0.03
EPHB4-209ENST00000492878 TICAM1Q8IUC6 712 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 SLC20A1Q8WUM9 679 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 KIAA1143Q96AT1 154 aaPredicted RBP15.26■□□□□ 0.03
EPHB4-209ENST00000492878 NAP1L5Q96NT1 182 aaPredicted RBP15.26■□□□□ 0.03
EPHB4-209ENST00000492878 DPYSL5Q9BPU6 564 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 PRDM8Q9NQV8 689 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 NOCTQ9UK39 431 aaKnown RBP15.26■□□□□ 0.03
EPHB4-209ENST00000492878 HPCAL4Q9UM19 191 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 TMEM184BQ9Y519 407 aaPredicted RBP15.26■□□□□ 0.03
EPHB4-209ENST00000492878 KCTD3Q9Y597 815 aa15.26■□□□□ 0.03
EPHB4-209ENST00000492878 IGHV1OR21-1A0A087WYE8 117 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 INSIG1O15503 277 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 SEMA7AO75326 666 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 ECEL1O95672 775 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 GM2AP17900 193 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 GNLYP22749 145 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 FANCCQ00597 558 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 CDR2Q01850 454 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 TSR1Q2NL82 804 aaKnown RBP15.25■□□□□ 0.03
EPHB4-209ENST00000492878 FAM131BQ86XD5 332 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 UNC5BQ8IZJ1 945 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 ZDHHC1Q8WTX9 485 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 STARD8Q92502 1023 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 LGR4Q9BXB1 951 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 NOL6Q9H6R4 1146 aaKnown RBP15.25■□□□□ 0.03
EPHB4-209ENST00000492878 CYP4F12Q9HCS2 524 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 TMEM9Q9P0T7 183 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 OR12D3Q9UGF7 316 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 DNAI1Q9UI46 699 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 TMEM59LQ9UK28 342 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 SHANK1Q9Y566 2161 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 POLQO75417 2590 aa15.25■□□□□ 0.03
EPHB4-209ENST00000492878 PRSS38A1L453 326 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 FAM72CH0Y354 149 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 PPM1DO15297 605 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 RAMP2O60895 175 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 VPS4BO75351 444 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 PIGNO95427 931 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 XPAP23025 273 aaPredicted RBP15.24■□□□□ 0.03
EPHB4-209ENST00000492878 NOMO3P69849 1222 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 MC2RQ01718 297 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 FMO1Q01740 532 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 RALGDSQ12967 914 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 NR1I3Q14994 352 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 ATP1A1-AS1Q5TC04 95 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 FAM72AQ5TYM5 149 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 NKAIN2Q5VXU1 208 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 NAA35Q5VZE5 725 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 FAM72DQ6L9T8 149 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 TMEM71Q6P5X7 295 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 ARCQ7LC44 396 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 FAM72BQ86X60 149 aa15.24■□□□□ 0.03
EPHB4-209ENST00000492878 ZSWIM9Q86XI8 627 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms