RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 PYROXD1Q8WU10 500 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 WDR83Q9BRX9 315 aaKnown RBP18.64■□□□□ 0.57
MCF2L-230ENST00000491028 TPSD1Q9BZJ3 242 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 GGT7Q9UJ14 662 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 PKP3Q9Y446 797 aa18.64■□□□□ 0.57
MCF2L-230ENST00000491028 KMT2EQ8IZD2 1858 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 LRRC72A6NJI9 287 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 AURKAO14965 403 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 AXIN1O15169 862 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 USP1O94782 785 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 POLBP06746 335 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 FAM153BP0C7A2 387 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 PSMA3P25788 255 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 MAGEA4P43358 317 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 LIG3P49916 1009 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 ZNF140P52738 457 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-230ENST00000491028 FASTKD3Q14CZ7 662 aaKnown RBP18.63■□□□□ 0.57
MCF2L-230ENST00000491028 BRD3Q15059 726 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 SKIDA1Q1XH10 827 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 FAM153CQ494X1 144 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 TMEM135Q86UB9 458 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 OR2T34Q8NGX1 318 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 AENQ8WTP8 325 aaKnown RBP18.63■□□□□ 0.57
MCF2L-230ENST00000491028 TTC25Q96NG3 672 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 CD93Q9NPY3 652 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 CHRAC1Q9NRG0 131 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 RAD18Q9NS91 495 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 PKD2L2Q9NZM6 624 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 IL17CQ9P0M4 197 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 ZC3H7BQ9UGR2 993 aaKnown RBP18.63■□□□□ 0.57
MCF2L-230ENST00000491028 CYP8B1Q9UNU6 501 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 ARL5AQ9Y689 179 aa18.63■□□□□ 0.57
MCF2L-230ENST00000491028 LRRK1Q38SD2 2015 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 IGHV1OR15-9A0A0B4J2B8 117 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 CCDC151A5D8V7 595 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 RGSL1A5PLK6 1076 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 A8MX80 341 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 STX7O15400 261 aaKnown RBP18.62■□□□□ 0.57
MCF2L-230ENST00000491028 ERLIN1O75477 346 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 PCDH8O95206 1070 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 SLC4A1P02730 911 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 C1SP09871 688 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 TDGF1P13385 188 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 C6P13671 934 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 PAMP19021 973 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 CD6P30203 668 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 HADHAP40939 763 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 SEMG2Q02383 582 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 PTSQ03393 145 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 ACVR1Q04771 509 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 SPANXN3Q5MJ09 141 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 ZDHHC20Q5W0Z9 365 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 FAM124AQ86V42 546 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 ANKMY2Q8IV38 441 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 CBARPQ8N350 705 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-230ENST00000491028 EID2BQ96D98 161 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 SPACA7Q96KW9 195 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 WRAP53Q9BUR4 548 aaKnown RBP18.62■□□□□ 0.57
MCF2L-230ENST00000491028 CDH19Q9H159 772 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 TREX1Q9NSU2 369 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 NLE1Q9NVX2 485 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-230ENST00000491028 KCTD5Q9NXV2 234 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 WSB2Q9NYS7 404 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-230ENST00000491028 NFKBIL1Q9UBC1 381 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-230ENST00000491028 FBXO4Q9UKT5 387 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 RPS6KL1Q9Y6S9 549 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 TTC28Q96AY4 2481 aa18.62■□□□□ 0.57
MCF2L-230ENST00000491028 SPAG6O75602 509 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 SEMA4FO95754 770 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 GSTA2P09210 222 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 TSHRP16473 764 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 AVPR2P30518 371 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 ACSL1P33121 698 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 PXNP49023 591 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-230ENST00000491028 PTPN5P54829 565 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 DCDC1P59894 354 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 RPS21P63220 83 aaKnown RBP18.61■□□□□ 0.57
MCF2L-230ENST00000491028 CREB5Q02930 508 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 MAP7D1Q3KQU3 841 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 ANKRD20A4Q4UJ75 823 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 USP39Q53GS9 565 aaKnown RBP18.61■□□□□ 0.57
MCF2L-230ENST00000491028 HP1BP3Q5SSJ5 553 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-230ENST00000491028 STEAP4Q687X5 459 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 TRMT10CQ7L0Y3 403 aaKnown RBP18.61■□□□□ 0.57
MCF2L-230ENST00000491028 CYP2U1Q7Z449 544 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 WDR5BQ86VZ2 330 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 IGDCC3Q8IVU1 814 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 NRSN1Q8IZ57 195 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 OR4K2Q8NGD2 314 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 OR13C4Q8NGS5 318 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 CAVIN3Q969G5 261 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 ZNF669Q96BR6 464 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-230ENST00000491028 C9orf72Q96LT7 481 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 COQ10AQ96MF6 247 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 ZNF778Q96MU6 729 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 TXLNGYQ9BZA5 131 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 CDC42EP4Q9H3Q1 356 aaKnown RBP18.61■□□□□ 0.57
MCF2L-230ENST00000491028 EML5Q05BV3 1969 aa18.61■□□□□ 0.57
MCF2L-230ENST00000491028 PLXNA2O75051 1894 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 TBC1D3DA0A087WVF3 549 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms