RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 CNGA3Q16281 694 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 CDKN3Q16667 212 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 ANKRD20A4Q4UJ75 823 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 DENND2CQ68D51 928 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 KIAA0930Q6ICG6 404 aaPredicted RBP13.25□□□□□ -0.29
SNX12-205ENST00000490561 ANO7Q6IWH7 933 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 CYS1Q717R9 158 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 CACUL1Q86Y37 369 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 LMNTD2Q8IXW0 634 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 NRSN1Q8IZ57 195 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 CNPY4Q8N129 248 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.25□□□□□ -0.29
SNX12-205ENST00000490561 ZNF669Q96BR6 464 aaPredicted RBP13.25□□□□□ -0.29
SNX12-205ENST00000490561 ERLEC1Q96DZ1 483 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 CFAP36Q96G28 342 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 HHIPQ96QV1 700 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 BTBD1Q9H0C5 482 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 CHRAC1Q9NRG0 131 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 TREX1Q9NSU2 369 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 POLR3BQ9NW08 1133 aaPredicted RBP13.25□□□□□ -0.29
SNX12-205ENST00000490561 SPATA6Q9NWH7 488 aaPredicted RBP13.25□□□□□ -0.29
SNX12-205ENST00000490561 NINJ2Q9NZG7 142 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 IL17CQ9P0M4 197 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 NFKBIL1Q9UBC1 381 aaPredicted RBP13.25□□□□□ -0.29
SNX12-205ENST00000490561 APPL1Q9UKG1 709 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 ARL5AQ9Y689 179 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 FAM169AQ9Y6X4 670 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 COL6A3P12111 3177 aa13.25□□□□□ -0.29
SNX12-205ENST00000490561 H7C0S8 307 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 BANF1O75531 89 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 RPP40O75818 363 aaKnown RBP13.24□□□□□ -0.29
SNX12-205ENST00000490561 CLDN7O95471 211 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 PDGFBP01127 241 aaPredicted RBP13.24□□□□□ -0.29
SNX12-205ENST00000490561 PRKCGP05129 697 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 H2AFXP16104 143 aaPredicted RBP13.24□□□□□ -0.29
SNX12-205ENST00000490561 LHCGRP22888 699 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 TPMTP51580 245 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 ADPRHP54922 357 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 DCDC1P59894 354 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 RPS21P63220 83 aaKnown RBP13.24□□□□□ -0.29
SNX12-205ENST00000490561 ILF2Q12905 390 aaKnown RBP13.24□□□□□ -0.29
SNX12-205ENST00000490561 RALGDSQ12967 914 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 MTM1Q13496 603 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 FASTKD3Q14CZ7 662 aaKnown RBP13.24□□□□□ -0.29
SNX12-205ENST00000490561 LONRF1Q17RB8 773 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 PDPK2PQ6A1A2 396 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 LIPIQ6XZB0 460 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 UNC5AQ6ZN44 842 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 ZNF765Q7L2R6 523 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 CYP2U1Q7Z449 544 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 IGDCC3Q8IVU1 814 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 AGGF1Q8N302 714 aaeCLIP13.24□□□□□ -0.29
SNX12-205ENST00000490561 OR2T34Q8NGX1 318 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 OR14C36Q8NHC7 312 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 CALML6Q8TD86 181 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 DTX3LQ8TDB6 740 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 SCG3Q8WXD2 468 aaKnown RBP13.24□□□□□ -0.29
SNX12-205ENST00000490561 SPACA7Q96KW9 195 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 C9orf72Q96LT7 481 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 PLEKHG4BQ96PX9 1271 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 C1QTNF7Q9BXJ2 289 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 FUT8Q9BYC5 575 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 SLC6A17Q9H1V8 727 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 VPS37BQ9H9H4 285 aa13.24□□□□□ -0.29
SNX12-205ENST00000490561 UNC80Q8N2C7 3258 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 A0A087WUV0 522 aaPredicted RBP13.23□□□□□ -0.29
SNX12-205ENST00000490561 WNT9AO14904 365 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 SPINT1O43278 529 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 RIPK2O43353 540 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 LAMTOR5O43504 91 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 LZTS3O60299 673 aaPredicted RBP13.23□□□□□ -0.29
SNX12-205ENST00000490561 PCDH8O95206 1070 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 SLC4A1P02730 911 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 PYGLP06737 847 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 C1SP09871 688 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 NMBRP28336 390 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 NUDT1P36639 197 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 SPAM1P38567 509 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 SPINT3P49223 89 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 LIG3P49916 1009 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 PRAMEP78395 509 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 CREB5Q02930 508 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 PTSQ03393 145 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 NAB1Q13506 487 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 ACOX1Q15067 660 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 KYNUQ16719 465 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 MAP7D1Q3KQU3 841 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 LRRC73Q5JTD7 316 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 HP1BP3Q5SSJ5 553 aaPredicted RBP13.23□□□□□ -0.29
SNX12-205ENST00000490561 AFTPHQ6ULP2 937 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 C3orf62Q6ZUJ4 267 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 TSPAN33Q86UF1 283 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 NLRP8Q86W28 1048 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 FBXL6Q8N531 539 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 OR4K2Q8NGD2 314 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 UBLCP1Q8WVY7 318 aaPredicted RBP13.23□□□□□ -0.29
SNX12-205ENST00000490561 ASB12Q8WXK4 309 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 CDKL2Q92772 493 aa13.23□□□□□ -0.29
SNX12-205ENST00000490561 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.23□□□□□ -0.292e-6■■■■■ 54.9
SNX12-205ENST00000490561 SGSM3Q96HU1 749 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 1346.1 ms