RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 SNRNP27Q8WVK2 155 aaKnown RBP10.41□□□□□ -0.74
TTC28-207ENST00000490475 CSPG4P5Q96PW8 444 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 CCDC3Q9BQI4 270 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 ASCL3Q9NQ33 180 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 SEPT3Q9UH03 358 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 SATB2Q9UPW6 733 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 ENTPD2Q9Y5L3 495 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 LRRK1Q38SD2 2015 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 COL6A6A6NMZ7 2263 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 UNC13CQ8NB66 2214 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 GOLGA6L6A8MZA4 724 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 H3BRJ5 948 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 J3KR12 359 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 NTN3O00634 580 aaPredicted RBP10.4□□□□□ -0.74
TTC28-207ENST00000490475 KLK10O43240 276 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 SOCS5O75159 536 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 PIGNO95427 931 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 TNNT1P13805 278 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 MAN1A1P33908 653 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 SERPINB6P35237 376 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 LIG3P49916 1009 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 VAC14Q08AM6 782 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 C1orf61Q13536 156 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 INPP5AQ14642 412 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 AFMIDQ63HM1 303 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 CLEC14AQ86T13 490 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 LRRC49Q8IUZ0 686 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 ARHGAP12Q8IWW6 846 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 NDUFAF2Q8N183 169 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 NPWQ8N729 165 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 OR56A4Q8NGH8 313 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 FAM71BQ8TC56 605 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 KIAA1524Q8TCG1 905 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 RAPGEF5Q92565 580 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 VOPP1Q96AW1 172 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 ECHDC3Q96DC8 303 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 EXOC2Q96KP1 924 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 BBC3Q96PG8 261 aaPredicted RBP10.4□□□□□ -0.74
TTC28-207ENST00000490475 PSKH2Q96QS6 385 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 GFM1Q96RP9 751 aaKnown RBP10.4□□□□□ -0.74
TTC28-207ENST00000490475 RBM15Q96T37 977 aaKnown RBP eCLIP10.4□□□□□ -0.74
TTC28-207ENST00000490475 LACRTQ9GZZ8 138 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 GOLPH3Q9H4A6 298 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 MBNL1Q9NR56 388 aaKnown RBP10.4□□□□□ -0.74
TTC28-207ENST00000490475 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.4□□□□□ -0.74
TTC28-207ENST00000490475 GULP1Q9UBP9 304 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 LCMT1Q9UIC8 334 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 GPR34Q9UPC5 381 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 PCDHGA7Q9Y5G6 932 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 RAI2Q9Y5P3 530 aa10.4□□□□□ -0.74
TTC28-207ENST00000490475 HELZ2Q9BYK8 2649 aaKnown RBP10.4□□□□□ -0.74
TTC28-207ENST00000490475 AHCTF1Q8WYP5 2266 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 A0A0U1RQJ8 604 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 CDRT15L2A8MXV6 281 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 DFFAO00273 331 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 BUB1BO60566 1050 aaPredicted RBP10.39□□□□□ -0.75
TTC28-207ENST00000490475 KRT7P08729 469 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 GLB1P16278 677 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 COMTP21964 271 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 KDELR1P24390 212 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 CCKBRP32239 447 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 TRIM23P36406 574 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 SCNN1BP51168 640 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 SKOR1P84550 965 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 DPYSL3Q14195 570 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 ZNF235Q14590 738 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 CLPPQ16740 277 aaPredicted RBP10.39□□□□□ -0.75
TTC28-207ENST00000490475 ALG11Q2TAA5 492 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 TAF1BQ53T94 588 aaPredicted RBP10.39□□□□□ -0.75
TTC28-207ENST00000490475 ANKRD20A8PQ5CZ79 823 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 LRRC73Q5JTD7 316 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 TPRG1LQ5T0D9 272 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 ZFYVE27Q5T4F4 411 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 XKR5Q6UX68 686 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 ARHGAP36Q6ZRI8 547 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 DPPA4Q7L190 304 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 CAMK1DQ8IU85 385 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 TSEN2Q8NCE0 465 aaKnown RBP10.39□□□□□ -0.75
TTC28-207ENST00000490475 PCDH19Q8TAB3 1148 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 ATXN7L3BQ96GX2 97 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 CRELD1Q96HD1 420 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 DESI2Q9BSY9 194 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 CLPBQ9H078 707 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 WDR26Q9H7D7 661 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 AKAP7Q9P0M2 348 aaPredicted RBP10.39□□□□□ -0.75
TTC28-207ENST00000490475 APPL1Q9UKG1 709 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 ALG6Q9Y672 507 aa10.39□□□□□ -0.75
TTC28-207ENST00000490475 GCN1Q92616 2671 aaKnown RBP10.39□□□□□ -0.75
TTC28-207ENST00000490475 A0A0A6YYK5 440 aaPredicted RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 D6RAR5 112 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 PSMD11O00231 422 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 PLD2O14939 933 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 INSIG1O15503 277 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 NUDT21O43809 227 aaKnown RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 KALRNO60229 2985 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 RECQL5O94762 991 aaPredicted RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 IPO7O95373 1038 aaKnown RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 PCCBP05166 539 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 PTMAP06454 111 aaKnown RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 PYGLP06737 847 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms