RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 SHROOM3Q8TF72 1996 aa11.37□□□□□ -0.59
CDCP1-203ENST00000490471 ACACAQ13085 2346 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 DDX3XO00571 662 aaKnown RBP eCLIP11.36□□□□□ -0.59
CDCP1-203ENST00000490471 NTN3O00634 580 aaPredicted RBP11.36□□□□□ -0.59
CDCP1-203ENST00000490471 NUDT21O43809 227 aaKnown RBP11.36□□□□□ -0.59
CDCP1-203ENST00000490471 KRT7P08729 469 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 SFTPCP11686 197 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 ZNF30P17039 623 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 MX2P20592 715 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 AMPD1P23109 780 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 CD82P27701 267 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 TEAD1P28347 426 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 CCKBRP32239 447 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 PPM1FP49593 454 aaPredicted RBP11.36□□□□□ -0.59
CDCP1-203ENST00000490471 DPYSQ14117 519 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 PDK2Q15119 407 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 IFI16Q16666 785 aaKnown RBP11.36□□□□□ -0.59
CDCP1-203ENST00000490471 CA9Q16790 459 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 TPRG1LQ5T0D9 272 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 OGFOD3Q6PK18 319 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 CRTC1Q6UUV9 634 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 POLNQ7Z5Q5 900 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 CLEC14AQ86T13 490 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 PIM3Q86V86 326 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 ARHGAP12Q8IWW6 846 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 NIPA2Q8N8Q9 360 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 NETO2Q8NC67 525 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 GPR156Q8NFN8 814 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 SCRN2Q96FV2 425 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 B3GNT4Q9C0J1 378 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 POLR1EQ9GZS1 481 aaKnown RBP11.36□□□□□ -0.59
CDCP1-203ENST00000490471 CDH19Q9H159 772 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 TCEAL2Q9H3H9 227 aaPredicted RBP11.36□□□□□ -0.59
CDCP1-203ENST00000490471 ASCL3Q9NQ33 180 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 TRNAU1APQ9NX07 287 aaKnown RBP11.36□□□□□ -0.59
CDCP1-203ENST00000490471 LRIT1Q9P2V4 623 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 ANAPC7Q9UJX3 599 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 RAI2Q9Y5P3 530 aa11.36□□□□□ -0.59
CDCP1-203ENST00000490471 LAMA1P25391 3075 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 PRSS38A1L453 326 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 D6RAR5 112 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 TRAFD1O14545 582 aaPredicted RBP11.35□□□□□ -0.59
CDCP1-203ENST00000490471 HTRA2O43464 458 aaPredicted RBP11.35□□□□□ -0.59
CDCP1-203ENST00000490471 H2AFZP0C0S5 128 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 RARAP10276 462 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 SKILP12757 684 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 CCNB1P14635 433 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 SLC2A4P14672 509 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 MAN1A1P33908 653 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 GPR3P46089 330 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 GPR1P46091 355 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 CFHR1Q03591 330 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 SLC10A7Q0GE19 358 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 MAP9Q49MG5 647 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 ARHGAP40Q5TG30 622 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 DENND2CQ68D51 928 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 RAET1GQ6H3X3 334 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 ALKBH5Q6P6C2 394 aaKnown RBP11.35□□□□□ -0.59
CDCP1-203ENST00000490471 H2AFVQ71UI9 128 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 NLRP8Q86W28 1048 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 AVL9Q8NBF6 648 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 KYQ8NBH2 561 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 KCTD6Q8NC69 237 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 CCHCR1Q8TD31 782 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 CTNNBL1Q8WYA6 563 aaPredicted RBP11.35□□□□□ -0.59
CDCP1-203ENST00000490471 FUBP1Q96AE4 644 aaKnown RBP11.35□□□□□ -0.59
CDCP1-203ENST00000490471 CSPG4P5Q96PW8 444 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 CCNL2Q96S94 520 aaPredicted RBP11.35□□□□□ -0.59
CDCP1-203ENST00000490471 PEBP4Q96S96 227 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 MGME1Q9BQP7 344 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 NUP85Q9BW27 656 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 ZMYND15Q9H091 742 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 HSD3B7Q9H2F3 369 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 DEF6Q9H4E7 631 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 CARS2Q9HA77 564 aaKnown RBP11.35□□□□□ -0.59
CDCP1-203ENST00000490471 TMEM63CQ9P1W3 806 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 UVRAGQ9P2Y5 699 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 B4GALT6Q9UBX8 382 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 PCDHGC4Q9Y5F7 938 aa11.35□□□□□ -0.59
CDCP1-203ENST00000490471 A8MX80 341 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 CDRT15L2A8MXV6 281 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 B4DGG1 531 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 NVLO15381 856 aaKnown RBP11.34□□□□□ -0.59
CDCP1-203ENST00000490471 CBFA2T2O43439 604 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 MAFKO60675 156 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 HEXIM1O94992 359 aaKnown RBP11.34□□□□□ -0.59
CDCP1-203ENST00000490471 CPNE6O95741 557 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 CCNCP24863 283 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 UGT1A5P35504 534 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 TNNT3P45378 269 aaPredicted RBP11.34□□□□□ -0.59
CDCP1-203ENST00000490471 RGRP47804 291 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 RPL26P61254 145 aaKnown RBP11.34□□□□□ -0.59
CDCP1-203ENST00000490471 CCL7P80098 99 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 FANCCQ00597 558 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 DPTQ07507 201 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 RALGDSQ12967 914 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 TRA2AQ13595 282 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDCP1-203ENST00000490471 SMTNL2Q2TAL5 461 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 ZSCAN23Q3MJ62 389 aa11.34□□□□□ -0.59
CDCP1-203ENST00000490471 CERCAMQ5T4B2 595 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms