RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, human

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFXN4-208	ENST00000490417	CKMT1A	P12532	417 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	TSHR	P16473	764 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	ITIH2	P19823	946 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	SPINK2	P20155	84 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	GBE1	Q04446	702 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	PPID	Q08752	370 aa	Known RBP	13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	AP1B1	Q10567	949 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	ZNF542P	Q5EBM4	170 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	TFDP3	Q5H9I0	405 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	ALG1L	Q6GMV1	187 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	CCDC70	Q6NSX1	233 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	C11orf63	Q6NUN7	778 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	ESRP1	Q6NXG1	681 aa	Known RBP	13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	LVRN	Q6Q4G3	990 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	ENPP7	Q6UWV6	458 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	KANSL1	Q7Z3B3	1105 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	GKN2	Q86XP6	184 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	PHACTR4	Q8IZ21	702 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	PQLC3	Q8N755	202 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	NUS1	Q96E22	293 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	WDR92	Q96MX6	357 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	SRPK1	Q96SB4	655 aa	Known RBP	13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	BAG1	Q99933	345 aa	Predicted RBP	13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	WDR26	Q9H7D7	661 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	MBNL1	Q9NR56	388 aa	Known RBP	13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	B4GALT6	Q9UBX8	382 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	KL	Q9UEF7	1012 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	SALL4	Q9UJQ4	1053 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	COQ6	Q9Y2Z9	468 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	PPIL1	Q9Y3C6	166 aa		13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	COL5A1	P20908	1838 aa	Predicted RBP	13.62	□□□□□ -0.23
SFXN4-208	ENST00000490417	TNFRSF10C	O14798	259 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	ZNF189	O75820	626 aa	Predicted RBP	13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	HEXIM1	O94992	359 aa	Known RBP	13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	TOP3B	O95985	862 aa	Known RBP	13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	JCHAIN	P01591	159 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	PRKCG	P05129	697 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	TGM2	P21980	687 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	ACADVL	P49748	655 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	HK3	P52790	923 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	KIAA1024L	P59773	190 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	DNAJC3	Q13217	504 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	PRRT3	Q5FWE3	981 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	DHRS13	Q6UX07	377 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	KIAA1328	Q86T90	577 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	ZSWIM9	Q86XI8	627 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	CCDC50	Q8IVM0	306 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	PGBD5	Q8N414	524 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	PLD5	Q8N7P1	536 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	CCHCR1	Q8TD31	782 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	P3H4	Q92791	437 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	UCKL1	Q9NWZ5	548 aa		13.61	□□□□□ -0.23
SFXN4-208	ENST00000490417	DOCK9	Q9BZ29	2069 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	EPG5	Q9HCE0	2579 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	TTC24	A2A3L6	582 aa	Predicted RBP	13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	BTNL10	A8MVZ5	291 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417		A8MX80	341 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	LMO7DN	F2Z398	122 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417		K7ESM1	405 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	TRIM38	O00635	465 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	MAP3K6	O95382	1288 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	CDC25B	P30305	580 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	TRIM23	P36406	574 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	SRP54	P61011	504 aa	Known RBP	13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	DYNLT1	P63172	113 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	IFI35	P80217	286 aa	Predicted RBP	13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	KIF5A	Q12840	1032 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	TRAF2	Q12933	501 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	RALGDS	Q12967	914 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	EIF2B5	Q13144	721 aa	Known RBP	13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	CCDC181	Q5TID7	509 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	DENND2C	Q68D51	928 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	PNCK	Q6P2M8	343 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	HID1	Q8IV36	788 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	KATNAL2	Q8IYT4	538 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	CACTIN-AS1	Q8N1I8	211 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	KDF1	Q8NAX2	398 aa	Predicted RBP	13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	OR6C4	Q8NGE1	309 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	OR56A4	Q8NGH8	313 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	EXD1	Q8NHP7	514 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	WDR48	Q8TAF3	677 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	KIAA1524	Q8TCG1	905 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	TFB1M	Q8WVM0	346 aa	Known RBP	13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	GATA6	Q92908	595 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	NAT6	Q93015	286 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	APOLD1	Q96LR9	279 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	LGMN	Q99538	433 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	CCDC86	Q9H6F5	360 aa	Known RBP	13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	PCDH9	Q9HC56	1237 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	SEPT10	Q9P0V9	454 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417	OR1A2	Q9Y585	309 aa		13.6	□□□□□ -0.23
SFXN4-208	ENST00000490417		A0A0J9YYE9	177 aa		13.59	□□□□□ -0.23
SFXN4-208	ENST00000490417	CCDC66	A2RUB6	948 aa		13.59	□□□□□ -0.23
SFXN4-208	ENST00000490417	GOLGA6C	A6NDK9	693 aa		13.59	□□□□□ -0.23
SFXN4-208	ENST00000490417	GOLGA6B	A6NDN3	693 aa		13.59	□□□□□ -0.23
SFXN4-208	ENST00000490417	SOWAHD	A6NJG2	315 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms