RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 LRRC66Q68CR7 880 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 ESRP1Q6NXG1 681 aaKnown RBP17.36■□□□□ 0.37
MDC1-206ENST00000489540 PNCKQ6P2M8 343 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 KDM7AQ6ZMT4 941 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 MACC1Q6ZN28 852 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 KANSL1Q7Z3B3 1105 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 HSD11B1LQ7Z5J1 315 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 TSPAN33Q86UF1 283 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 TRIM58Q8NG06 486 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 SPATA22Q8NHS9 363 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 BTN2A2Q8WVV5 523 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 DTD2Q96FN9 168 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 TRIB3Q96RU7 358 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 CABIN1Q9Y6J0 2220 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 GOLGA8CPA6NN73 597 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 CACNB4O00305 520 aaPredicted RBP17.35■□□□□ 0.37
MDC1-206ENST00000489540 TNFSF14O43557 240 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 SDC3O75056 442 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 MT-CYBP00156 380 aaPredicted RBP17.35■□□□□ 0.37
MDC1-206ENST00000489540 EPOP01588 193 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 ETV3P41162 512 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 EIF2B5Q13144 721 aaKnown RBP17.35■□□□□ 0.37
MDC1-206ENST00000489540 KLF1Q13351 362 aaPredicted RBP17.35■□□□□ 0.37
MDC1-206ENST00000489540 ZNF542PQ5EBM4 170 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 TPRG1LQ5T0D9 272 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 FAM182AQ5T1J6 154 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 SEL1L2Q5TEA6 688 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 Q6ZVL8 140 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 KDELC2Q7Z4H8 507 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 TECPR1Q7Z6L1 1165 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 NLRP8Q86W28 1048 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 SLC25A45Q8N413 288 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 PLA2G15Q8NCC3 412 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 CCHCR1Q8TD31 782 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 SRPK1Q96SB4 655 aaKnown RBP17.35■□□□□ 0.37
MDC1-206ENST00000489540 OR1A2Q9Y585 309 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 LAMA1P25391 3075 aa17.35■□□□□ 0.37
MDC1-206ENST00000489540 PDE2AO00408 941 aaPredicted RBP17.34■□□□□ 0.37
MDC1-206ENST00000489540 CACNA1AO00555 2505 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 PMPCBO75439 489 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 NDST3O95803 873 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 TSHRP16473 764 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 JUNDP17535 347 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 NFKB1P19838 968 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 KELP23276 732 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 TEAD1P28347 426 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 TNNT3P45378 269 aaPredicted RBP17.34■□□□□ 0.37
MDC1-206ENST00000489540 BLKP51451 505 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 STC1P52823 247 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 PPARDQ03181 441 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 DPTQ07507 201 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 NFATC4Q14934 902 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 PCSK7Q16549 785 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 HS1BP3Q53T59 392 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 ITPRIPL1Q6GPH6 555 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 ENPP7Q6UWV6 458 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 NRSN1Q8IZ57 195 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 EID2Q8N6I1 236 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 TBATAQ96M53 351 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 SMIM14Q96QK8 99 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 SLC13A1Q9BZW2 595 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 C10orf88Q9H8K7 445 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 MAGEE1Q9HCI5 957 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 UBP1Q9NZI7 540 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 FTSJ1Q9UET6 329 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 RSPH14Q9UHP6 348 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 APOBEC2Q9Y235 224 aaKnown RBP17.34■□□□□ 0.37
MDC1-206ENST00000489540 CSNK1G3Q9Y6M4 447 aa17.34■□□□□ 0.37
MDC1-206ENST00000489540 DOCK9Q9BZ29 2069 aa17.33■□□□□ 0.37
MDC1-206ENST00000489540 SHROOM3Q8TF72 1996 aa17.33■□□□□ 0.37
MDC1-206ENST00000489540 RGSL1A5PLK6 1076 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 SCAMP1O15126 338 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 KCNN4O15554 427 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 TRIM16O95361 564 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 CLDN7O95471 211 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 LDOC1O95751 146 aaPredicted RBP17.33■□□□□ 0.36
MDC1-206ENST00000489540 KIAA1024LP59773 190 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 MPP3Q13368 585 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 GALNT3Q14435 633 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 CDKN3Q16667 212 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 FAXCQ5TGI0 409 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 ZNF765Q7L2R6 523 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 FAM118BQ9BPY3 351 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 FRMD8P1Q9BZ68 369 aaPredicted RBP17.33■□□□□ 0.36
MDC1-206ENST00000489540 CARD9Q9H257 536 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 WDR26Q9H7D7 661 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 USP29Q9HBJ7 922 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 UCKL1Q9NWZ5 548 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 SPASTQ9UBP0 616 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 KLF15Q9UIH9 416 aa17.33■□□□□ 0.36
MDC1-206ENST00000489540 A0A0U1RQS6 177 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 C1orf232A0A0U1RR37 186 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 LOC285095A0A1B0GVY8 99 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 ANXA9O76027 345 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 PYGLP06737 847 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 ALPPL2P10696 532 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 WNT3AP56704 352 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 ANKRD20A2Q5SQ80 823 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 ANKRD20A1Q5TYW2 823 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 ANKRD20A3Q5VUR7 823 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms