RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 HTR1BP28222 390 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 ARSDP51689 593 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 B4GALNT1Q00973 533 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 NSUN2Q08J23 767 aaKnown RBP eCLIP11.78□□□□□ -0.52
ACTN4-206ENST00000489451 IHHQ14623 411 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 ZSCAN23Q3MJ62 389 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 LINC00303Q3SY05 128 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 C14orf28Q4W4Y0 310 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 SPECC1LQ69YQ0 1117 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 PNCKQ6P2M8 343 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 Q8N9G6 341 aaPredicted RBP11.78□□□□□ -0.52
ACTN4-206ENST00000489451 EXD3Q8N9H8 876 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 FAM46DQ8NEK8 389 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 FNIP1Q8TF40 1166 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 CINPQ9BW66 212 aaPredicted RBP11.78□□□□□ -0.52
ACTN4-206ENST00000489451 HAUS4Q9H6D7 363 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 SP110Q9HB58 689 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
ACTN4-206ENST00000489451 SPATS2LQ9NUQ6 558 aaKnown RBP11.78□□□□□ -0.52
ACTN4-206ENST00000489451 PARVAQ9NVD7 372 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 FOXJ2Q9P0K8 574 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 SDK2Q58EX2 2172 aa11.78□□□□□ -0.52
ACTN4-206ENST00000489451 UBR5O95071 2799 aaPredicted RBP11.78□□□□□ -0.52
ACTN4-206ENST00000489451 SYCE3A1L190 88 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 PRSS38A1L453 326 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 B4DGG1 531 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 EIF3CLB5ME19 914 aaKnown RBP11.77□□□□□ -0.53
ACTN4-206ENST00000489451 C9orf172C9J069 976 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 TNFRSF10CO14798 259 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 B4GAT1O43505 415 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 SOD1P00441 154 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 CEACAM5P06731 702 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 SCNN1BP51168 640 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 MAZP56270 477 aaKnown RBP11.77□□□□□ -0.53
ACTN4-206ENST00000489451 BCL2L1Q07817 233 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 TRAF2Q12933 501 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 EIF3IQ13347 325 aaKnown RBP11.77□□□□□ -0.53
ACTN4-206ENST00000489451 RFTN1Q14699 578 aaPredicted RBP11.77□□□□□ -0.53
ACTN4-206ENST00000489451 LBRQ14739 615 aaKnown RBP11.77□□□□□ -0.53
ACTN4-206ENST00000489451 DPYSL2Q16555 572 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 SMTNL2Q2TAL5 461 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 PPP6R3Q5H9R7 873 aaPredicted RBP11.77□□□□□ -0.53
ACTN4-206ENST00000489451 CFAP58Q5T655 872 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 CCDC81Q6ZN84 652 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 RFLNAQ6ZTI6 216 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 HSD11B1LQ7Z5J1 315 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 TAF8Q7Z7C8 310 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 SCG3Q8WXD2 468 aaKnown RBP11.77□□□□□ -0.53
ACTN4-206ENST00000489451 CCDC97Q96F63 343 aaPredicted RBP11.77□□□□□ -0.53
ACTN4-206ENST00000489451 SMIM14Q96QK8 99 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 CCNL2Q96S94 520 aaPredicted RBP11.77□□□□□ -0.53
ACTN4-206ENST00000489451 EIF3CQ99613 913 aaKnown RBP11.77□□□□□ -0.53
ACTN4-206ENST00000489451 MGME1Q9BQP7 344 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 FRMD8Q9BZ67 464 aaPredicted RBP11.77□□□□□ -0.53
ACTN4-206ENST00000489451 SEMA6CQ9H3T2 930 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 CYP4F12Q9HCS2 524 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 CNOT8Q9UFF9 292 aaKnown RBP11.77□□□□□ -0.53
ACTN4-206ENST00000489451 PISDQ9UG56 409 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 MYO6Q9UM54 1294 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 LOXL2Q9Y4K0 774 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 PCDHGC4Q9Y5F7 938 aa11.77□□□□□ -0.53
ACTN4-206ENST00000489451 ZFC3H1O60293 1989 aaKnown RBP11.77□□□□□ -0.53
ACTN4-206ENST00000489451 SPTAN1Q13813 2472 aaKnown RBP11.77□□□□□ -0.53
ACTN4-206ENST00000489451 PRAMEF33A0A0G2JMD5 474 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 NPIPB15A6NHN6 443 aaPredicted RBP11.76□□□□□ -0.53
ACTN4-206ENST00000489451 CACNB4O00305 520 aaPredicted RBP11.76□□□□□ -0.53
ACTN4-206ENST00000489451 MAFKO60675 156 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 PRAMEF10O60809 474 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 HEXIM1O94992 359 aaKnown RBP11.76□□□□□ -0.53
ACTN4-206ENST00000489451 SERPINC1P01008 464 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 FTLP02792 175 aaPredicted RBP11.76□□□□□ -0.53
ACTN4-206ENST00000489451 FGF1P05230 155 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 MYCLP1P12525 358 aaPredicted RBP11.76□□□□□ -0.53
ACTN4-206ENST00000489451 PNLIPP16233 465 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 AMPD1P23109 780 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 AK4P27144 223 aaPredicted RBP11.76□□□□□ -0.53
ACTN4-206ENST00000489451 PRKCIP41743 596 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 CCR10P46092 362 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 HCAR3P49019 387 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 MAXP61244 160 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 AP1S1P61966 158 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 NR1D2Q14995 579 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 C16orf72Q14CZ0 275 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 TMCO4Q5TGY1 634 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 ZNF574Q6ZN55 896 aaPredicted RBP11.76□□□□□ -0.53
ACTN4-206ENST00000489451 ZNF438Q7Z4V0 828 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 POLNQ7Z5Q5 900 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 TSPAN33Q86UF1 283 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 HEATR4Q86WZ0 1026 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 PSTKQ8IV42 348 aaKnown RBP11.76□□□□□ -0.53
ACTN4-206ENST00000489451 OR6C4Q8NGE1 309 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 ATL2Q8NHH9 583 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 GPBAR1Q8TDU6 330 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 PATE1Q8WXA2 126 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 PMEPA1Q969W9 287 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 NUS1Q96E22 293 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 DTD2Q96FN9 168 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 MED8Q96G25 268 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 TMEM74Q96NL1 305 aa11.76□□□□□ -0.53
ACTN4-206ENST00000489451 NUDT22Q9BRQ3 303 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms