RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 SORT1Q99523 831 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 SEPT5Q99719 369 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 MRPL57Q9BQC6 102 aaKnown RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 TRMOQ9BU70 441 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 CCDC106Q9BWC9 280 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 C1QTNF1Q9BXJ1 281 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 ACE2Q9BYF1 805 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 NMUR2Q9GZQ4 415 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 DRC3Q9H069 523 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 ILKAPQ9H0C8 392 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 S1PR5Q9H228 398 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 MRPL46Q9H2W6 279 aaKnown RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 MFSD1Q9H3U5 465 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 RNPEPL1Q9HAU8 725 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 PDFQ9HBH1 243 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 MRPL17Q9NRX2 175 aaKnown RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 NCKIPSDQ9NZQ3 722 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 MPP6Q9NZW5 540 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 HACD3Q9P035 362 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 UXTQ9UBK9 157 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 SEPT3Q9UH03 358 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 STOML2Q9UJZ1 356 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 FBXO5Q9UKT4 447 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 DENND4CQ5VZ89 1909 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 NUP205Q92621 2012 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 MIA3Q5JRA6 1907 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 A0A1B0GVM2 712 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 FAM95CA0A1B0GW59 222 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 ILVBLA1L0T0 632 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 TCAF2A6NFQ2 919 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 SOBPA7XYQ1 873 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 SPECC1L-ADORA2AF8WAN1 911 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 CDK2AP1O14519 115 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 PER2O15055 1255 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 PFDN6O15212 129 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 GSC2O15499 205 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 LINC01565O15544 149 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 ADAM12O43184 909 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 TBX10O75333 385 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 PMPCBO75439 489 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 ABLIM3O94929 683 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 CBX6O95503 412 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 HSPA4LO95757 839 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 SERPINF2P08697 491 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 RBP1P09455 135 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 TPH1P17752 444 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 PFKLP17858 780 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 NUMBP49757 651 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 PGFP49763 221 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 CLCN4P51793 760 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 SATB1Q01826 763 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 SLC10A7Q0GE19 358 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 SF3A3Q12874 501 aaKnown RBP eCLIP8.49□□□□□ -1.05
VTI1A-207ENST00000489357 DUSP4Q13115 394 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 MSLNQ13421 630 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-207ENST00000489357 TUBB3Q13509 450 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 RAB33AQ14088 237 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 RCN2Q14257 317 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 ZNF235Q14590 738 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 VEPH1Q14D04 833 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 TRMT5Q32P41 509 aaKnown RBP8.49□□□□□ -1.05
VTI1A-207ENST00000489357 LEXMQ3ZCV2 418 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 CMPK2Q5EBM0 449 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 PPM1JQ5JR12 505 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 CFAP157Q5JU67 520 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 HECTD3Q5T447 861 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 C6orf163Q5TEZ5 329 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 AGAP9Q5VTM2 703 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 RAP1GAP2Q684P5 730 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 ZNF787Q6DD87 383 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 ZNF470Q6ECI4 717 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 MRNIPQ6NTE8 343 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 SYCE2Q6PIF2 218 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 CES3Q6UWW8 571 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 CMC1Q7Z7K0 106 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 LONP2Q86WA8 852 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 KIF2BQ8N4N8 673 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 TEX9Q8N6V9 391 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 NETO2Q8NC67 525 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 TTC8Q8TAM2 541 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 ARRDC2Q8TBH0 407 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 BRSK1Q8TDC3 778 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 MICAL1Q8TDZ2 1067 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 USP33Q8TEY7 942 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 USP13Q92995 863 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-207ENST00000489357 THOC1Q96FV9 657 aaKnown RBP8.49□□□□□ -1.05
VTI1A-207ENST00000489357 ZNF419Q96HQ0 510 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-207ENST00000489357 CNDP1Q96KN2 507 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 PGLYRP2Q96PD5 576 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 TCF12Q99081 682 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 APOL2Q9BQE5 337 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 MGME1Q9BQP7 344 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 CCDC28BQ9BUN5 200 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 CDH19Q9H159 772 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 TASP1Q9H6P5 420 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 UBE2ZQ9H832 354 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-207ENST00000489357 NT5MQ9NPB1 228 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 FBXO6Q9NRD1 293 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-207ENST00000489357 NDFIP2Q9NV92 336 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms