RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 CASP10Q92851 521 aa19.55■□□□□ 0.72
HMG20B-213ENST00000488973 TSPAN17Q96FV3 270 aa19.55■□□□□ 0.72
HMG20B-213ENST00000488973 OLFM1Q99784 485 aa19.55■□□□□ 0.72
HMG20B-213ENST00000488973 CD320Q9NPF0 282 aa19.55■□□□□ 0.72
HMG20B-213ENST00000488973 GMPR2Q9P2T1 348 aaKnown RBP19.55■□□□□ 0.72
HMG20B-213ENST00000488973 AURKCQ9UQB9 309 aa19.55■□□□□ 0.72
HMG20B-213ENST00000488973 NDUFAF1Q9Y375 327 aa19.55■□□□□ 0.72
HMG20B-213ENST00000488973 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.54■□□□□ 0.72
HMG20B-213ENST00000488973 UBFD1O14562 309 aaKnown RBP19.54■□□□□ 0.72
HMG20B-213ENST00000488973 GABRDO14764 452 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 CLASP2O75122 1294 aaKnown RBP19.54■□□□□ 0.72
HMG20B-213ENST00000488973 MYL3P08590 195 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 USP17L7P0C7H9 530 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 PSMA4P25789 261 aaKnown RBP19.54■□□□□ 0.72
HMG20B-213ENST00000488973 ATP6AP1Q15904 470 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 LCN8Q6JVE9 175 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 GET4Q7L5D6 327 aaPredicted RBP19.54■□□□□ 0.72
HMG20B-213ENST00000488973 LYSMD3Q7Z3D4 306 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 MINDY1Q8N5J2 469 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 PHF21BQ96EK2 531 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 UBXN10Q96LJ8 280 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 CXorf21Q9HAI6 301 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 VTA1Q9NP79 307 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 CDC14AQ9UNH5 594 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 AURKAO14965 403 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 ALDOCP09972 364 aaKnown RBP19.54■□□□□ 0.72
HMG20B-213ENST00000488973 HOXD11P31277 338 aaPredicted RBP19.54■□□□□ 0.72
HMG20B-213ENST00000488973 PLK1P53350 603 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 RELAQ04206 551 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 KIAA0319Q5VV43 1072 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 ARHGAP36Q6ZRI8 547 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 ATPAF2Q8N5M1 289 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 CALML6Q8TD86 181 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 L3HYPDHQ96EM0 354 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 C19orf60Q96EN9 201 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 CENPNQ96H22 339 aaPredicted RBP19.54■□□□□ 0.72
HMG20B-213ENST00000488973 OSBPL10Q9BXB5 764 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 ACTR3BQ9P1U1 418 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 MAP10Q9P2G4 905 aa19.54■□□□□ 0.72
HMG20B-213ENST00000488973 ZFC3H1O60293 1989 aaKnown RBP19.54■□□□□ 0.72
HMG20B-213ENST00000488973 A0A0J9YYE9 177 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 DFFAO00273 331 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 DCKP27707 260 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 AXLP30530 894 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 LEPRP48357 1165 aaKnown RBP19.53■□□□□ 0.72
HMG20B-213ENST00000488973 WSCD1Q658N2 575 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 CLEC6AQ6EIG7 209 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 GPRIN1Q7Z2K8 1008 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 SPRED1Q7Z699 444 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 GABPB2Q8TAK5 448 aaPredicted RBP19.53■□□□□ 0.72
HMG20B-213ENST00000488973 SEPT8Q92599 483 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.53■□□□□ 0.72
HMG20B-213ENST00000488973 VPS50Q96JG6 964 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 OSMRQ99650 979 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 SMOQ99835 787 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 DCUN1D5Q9BTE7 237 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 FAM49AQ9H0Q0 323 aaPredicted RBP19.53■□□□□ 0.72
HMG20B-213ENST00000488973 FBRSL1Q9HCM7 1045 aaKnown RBP19.53■□□□□ 0.72
HMG20B-213ENST00000488973 TBC1D23Q9NUY8 699 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 SFMBT1Q9UHJ3 866 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 DARSP14868 501 aaKnown RBP19.53■□□□□ 0.72
HMG20B-213ENST00000488973 RABGGTBP53611 331 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 SPATS1Q496A3 300 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 ZNF354CQ86Y25 554 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 SPPL2CQ8IUH8 684 aa19.53■□□□□ 0.72
HMG20B-213ENST00000488973 ZNF419Q96HQ0 510 aaPredicted RBP19.53■□□□□ 0.72
HMG20B-213ENST00000488973 RPF2Q9H7B2 306 aaKnown RBP19.53■□□□□ 0.72
HMG20B-213ENST00000488973 RNF103-CHMP3A0A140T963 221 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 ATP6AP2A0A1C7CYW4 349 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 DYTNA2CJ06 578 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 GLTPD2A6NH11 291 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 ATP6AP2O75787 350 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 RASAL1O95294 804 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 EML3Q32P44 896 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 ZNF829Q3KNS6 432 aaPredicted RBP19.52■□□□□ 0.72
HMG20B-213ENST00000488973 ZNF678Q5SXM1 525 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 TMTC4Q5T4D3 741 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 RANBP10Q6VN20 620 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 BORCS5Q969J3 196 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 THAP11Q96EK4 314 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 MYRFLQ96LU7 910 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 FSD1LQ9BXM9 530 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 CRTAC1Q9NQ79 661 aa19.52■□□□□ 0.72
HMG20B-213ENST00000488973 TDRKHQ9Y2W6 561 aaKnown RBP19.52■□□□□ 0.72
HMG20B-213ENST00000488973 NYNRINQ9P2P1 1898 aaKnown RBP19.52■□□□□ 0.71
HMG20B-213ENST00000488973 H3BMQ9 156 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 GIPC1O14908 333 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 MATN3O15232 486 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 ATE1O95260 518 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 FCGR1AP12314 374 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 KIF19Q2TAC6 998 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 UGT3A2Q3SY77 523 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 ZNF789Q5FWF6 425 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 ABRAXAS1Q6UWZ7 409 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 FAM35AQ86V20 835 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 ARHGAP12Q8IWW6 846 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 CLYBLQ8N0X4 340 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 ZMIZ2Q8NF64 920 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 GIPC3Q8TF64 312 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 LRCH3Q96II8 777 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms