RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 KRT40Q6A162 431 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 ETFRF1Q6IPR1 90 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 RGS7BPQ6MZT1 257 aaPredicted RBP3.46□□□□□ -1.86
PRPF4-203ENST00000488937 TSSK4Q6SA08 328 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 RGS9BPQ6ZS82 235 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 C1orf186Q6ZWK4 172 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 DOK3Q7L591 496 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 OTUD6AQ7L8S5 288 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 TADA2BQ86TJ2 420 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 IQCHQ86VS3 1027 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 EGFL6Q8IUX8 553 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.46□□□□□ -1.86
PRPF4-203ENST00000488937 C11orf44Q8N8P7 122 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 ENDOVQ8N8Q3 282 aaKnown RBP3.46□□□□□ -1.86
PRPF4-203ENST00000488937 SETD9Q8NE22 299 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 DBF4BQ8NFT6 615 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 OR7G3Q8NG95 312 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 OCC1Q8TAD7 63 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 ZNF75CPQ92670 426 aaPredicted RBP3.46□□□□□ -1.86
PRPF4-203ENST00000488937 TEKT1Q969V4 418 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 PTERQ96BW5 349 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 ARHGEF26Q96DR7 871 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 ZNF512Q96ME7 567 aaPredicted RBP3.46□□□□□ -1.86
PRPF4-203ENST00000488937 ZNF830Q96NB3 372 aaPredicted RBP3.46□□□□□ -1.86
PRPF4-203ENST00000488937 LRRC3BQ96PB8 259 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 PARK7Q99497 189 aaKnown RBP3.46□□□□□ -1.86
PRPF4-203ENST00000488937 EIF3CQ99613 913 aaKnown RBP3.46□□□□□ -1.86
PRPF4-203ENST00000488937 EGFL8Q99944 293 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 TCHPQ9BT92 498 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 C1QTNF1Q9BXJ1 281 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 ACPTQ9BZG2 426 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 NUAK2Q9H093 628 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 SMOC2Q9H3U7 446 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 PLK3Q9H4B4 646 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 PLEKHA4Q9H4M7 779 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 TMEM206Q9H813 350 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 TUFT1Q9NNX1 390 aa3.46□□□□□ -1.86
PRPF4-203ENST00000488937 ARMCX3Q9UH62 379 aaPredicted RBP3.46□□□□□ -1.86
PRPF4-203ENST00000488937 SPATA31A3Q5VYP0 1347 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 FAM205AQ6ZU69 1335 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 SALL3Q9BXA9 1300 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 A0A0B4J203 849 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 CCDC195A0A1B0GUA6 201 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 ZSCAN5CA6NGD5 496 aaPredicted RBP3.45□□□□□ -1.86
PRPF4-203ENST00000488937 CYSRT1A8MQ03 144 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 USP17L23D6RBM5 183 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 O00370 1275 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 CASQ2O14958 399 aaPredicted RBP3.45□□□□□ -1.86
PRPF4-203ENST00000488937 HOXA3O43365 443 aaPredicted RBP3.45□□□□□ -1.86
PRPF4-203ENST00000488937 PLRG1O43660 514 aaKnown RBP3.45□□□□□ -1.86
PRPF4-203ENST00000488937 CEP104O60308 925 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 TSC22D2O75157 780 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 SPAG6O75602 509 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 AKAP3O75969 853 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 STC2O76061 302 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 SUN1O94901 812 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 ITGB1P05556 798 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 PDHBP11177 359 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 CYP4B1P13584 511 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 ACHEP22303 614 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 GCSHP23434 173 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 MGAT1P26572 445 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 CD27P26842 260 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 GABRB2P47870 512 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 BLKP51451 505 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 SUOXP51687 545 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 RABGGTBP53611 331 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 NPEPPSP55786 919 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 ACTR1AP61163 376 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 CCNA1P78396 465 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 GBE1Q04446 702 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 BMPR2Q13873 1038 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 GAMTQ14353 236 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 FGFBP1Q14512 234 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 IL13RA2Q14627 380 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 RNPS1Q15287 305 aaKnown RBP3.45□□□□□ -1.86
PRPF4-203ENST00000488937 ST3GAL2Q16842 350 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 RABL6Q3YEC7 729 aaPredicted RBP3.45□□□□□ -1.86
PRPF4-203ENST00000488937 GXYLT1Q4G148 440 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 HSP90AA5PQ58FG0 334 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 C1QL3Q5VWW1 255 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 NAIF1Q69YI7 327 aaPredicted RBP3.45□□□□□ -1.86
PRPF4-203ENST00000488937 SFRP4Q6FHJ7 346 aaPredicted RBP3.45□□□□□ -1.86
PRPF4-203ENST00000488937 KLHL10Q6JEL2 608 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 NEK5Q6P3R8 708 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 C16orf87Q6PH81 154 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 KCNV1Q6PIU1 500 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 FIP1L1Q6UN15 594 aaKnown RBP3.45□□□□□ -1.86
PRPF4-203ENST00000488937 SLC30A10Q6XR72 485 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 PPP1R21Q6ZMI0 780 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 MARK2Q7KZI7 788 aaKnown RBP3.45□□□□□ -1.86
PRPF4-203ENST00000488937 RUFY3Q7L099 469 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 RHOUQ7L0Q8 258 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 TAOK1Q7L7X3 1001 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 ZNF551Q7Z340 670 aaPredicted RBP3.45□□□□□ -1.86
PRPF4-203ENST00000488937 MIER3Q7Z3K6 550 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 RD3Q7Z3Z2 195 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 ABI3BPQ7Z7G0 1075 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 TLK2Q86UE8 772 aa3.45□□□□□ -1.86
PRPF4-203ENST00000488937 ELMOD2Q8IZ81 293 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms