RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 COQ10AQ96MF6 247 aa15.92■□□□□ 0.14
ERGIC3-217ENST00000488935 CCNL2Q96S94 520 aaPredicted RBP15.92■□□□□ 0.14
ERGIC3-217ENST00000488935 WDR26Q9H7D7 661 aa15.92■□□□□ 0.14
ERGIC3-217ENST00000488935 CARS2Q9HA77 564 aaKnown RBP15.92■□□□□ 0.14
ERGIC3-217ENST00000488935 NOD2Q9HC29 1040 aa15.92■□□□□ 0.14
ERGIC3-217ENST00000488935 FOXJ2Q9P0K8 574 aa15.92■□□□□ 0.14
ERGIC3-217ENST00000488935 TMEM63CQ9P1W3 806 aa15.92■□□□□ 0.14
ERGIC3-217ENST00000488935 CD84Q9UIB8 345 aa15.92■□□□□ 0.14
ERGIC3-217ENST00000488935 TRBV23OR9-2A0A075B6M9 112 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 PRSS38A1L453 326 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 MAP3K6O95382 1288 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 CCDC172P0C7W6 258 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 LHCGRP22888 699 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 MPSTP25325 297 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 ALDH4A1P30038 563 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 HTR7P34969 479 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 TRIM23P36406 574 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 GNPDA1P46926 289 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 CYP4F2P78329 520 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 NFKB2Q00653 900 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 MMRN1Q13201 1228 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 ARHGEF7Q14155 803 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 HLTFQ14527 1009 aaKnown RBP eCLIP15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 ZNF235Q14590 738 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 C14orf28Q4W4Y0 310 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 CERCAMQ5T4B2 595 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 CCDC183Q5T5S1 534 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 TMCO4Q5TGY1 634 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 NKAIN2Q5VXU1 208 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 OGFOD3Q6PK18 319 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 SLC30A9Q6PML9 568 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 HEATR4Q86WZ0 1026 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 EXD3Q8N9H8 876 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 RCBTB1Q8NDN9 531 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 ATL2Q8NHH9 583 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 WDR48Q8TAF3 677 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 PMEPA1Q969W9 287 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 NUS1Q96E22 293 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 STRADBQ9C0K7 418 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 SEPT3Q9UH03 358 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 TMEM98Q9Y2Y6 226 aa15.91■□□□□ 0.14
ERGIC3-217ENST00000488935 NPIPB15A6NHN6 443 aaPredicted RBP15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 CPP00450 1065 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 FGF1P05230 155 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 CEACAM5P06731 702 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 RARAP10276 462 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 CCL4P13236 92 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 GLB1P16278 677 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 WT1P19544 449 aaPredicted RBP15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 B4GALNT1Q00973 533 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 NSUN2Q08J23 767 aaKnown RBP eCLIP15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 KLHL30Q0D2K2 578 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 C16orf72Q14CZ0 275 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 Q6ZVL8 140 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 POLNQ7Z5Q5 900 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 TRIM74Q86UV6 250 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 ZNF761Q86XN6 746 aaPredicted RBP15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 EXTL1Q92935 676 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 CCDC97Q96F63 343 aaPredicted RBP15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 GBP4Q96PP9 640 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 PSKH2Q96QS6 385 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 NUDT22Q9BRQ3 303 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 SUFUQ9UMX1 484 aa15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 FLNBO75369 2602 aaKnown RBP15.9■□□□□ 0.14
ERGIC3-217ENST00000488935 H3BRJ5 948 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 J3QKU1 62 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 HTRA2O43464 458 aaPredicted RBP15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 MAFKO60675 156 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 HEXIM1O94992 359 aaKnown RBP15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 ECEL1O95672 775 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 PDHA1P08559 390 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 CD48P09326 243 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 CR2P20023 1033 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 CCKBRP32239 447 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 VIPR1P32241 457 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 ANP32AP39687 249 aaKnown RBP15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 AP1S1P61966 158 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 POLR2LP62875 67 aaKnown RBP15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 ZFP36L1Q07352 338 aaKnown RBP15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 IHHQ14623 411 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 RFTN1Q14699 578 aaPredicted RBP15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 LINC00303Q3SY05 128 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 RAET1GQ6H3X3 334 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 ZNF574Q6ZN55 896 aaPredicted RBP15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 MARK2Q7KZI7 788 aaKnown RBP15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 ZDHHC1Q8WTX9 485 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 SNRNP27Q8WVK2 155 aaKnown RBP15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 TMEM74Q96NL1 305 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 CSPG4P5Q96PW8 444 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 NT5MQ9NPB1 228 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 DONSONQ9NYP3 566 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 AIPL1Q9NZN9 384 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 TAAR2Q9P1P5 351 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 APPL1Q9UKG1 709 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 SDK2Q58EX2 2172 aa15.89■□□□□ 0.13
ERGIC3-217ENST00000488935 TENM4Q6N022 2769 aa15.88■□□□□ 0.13
ERGIC3-217ENST00000488935 BSNQ9UPA5 3926 aa15.88■□□□□ 0.13
ERGIC3-217ENST00000488935 ZFC3H1O60293 1989 aaKnown RBP15.88■□□□□ 0.13
ERGIC3-217ENST00000488935 CFAP69A5D8W1 941 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms