RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 NR1H2P55055 460 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 GTF2H2Q13888 395 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 TMEM187Q14656 261 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 SLC18A3Q16572 532 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 UGP2Q16851 508 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 EDRF1Q3B7T1 1238 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 MMEL1Q495T6 779 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 CCDC181Q5TID7 509 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 GTF2H2CQ6P1K8 395 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 ZNF790Q6PG37 636 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 SLC36A4Q6YBV0 504 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 ASB18Q6ZVZ8 466 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 TBC1D26Q86UD7 250 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 FOXRED2Q8IWF2 684 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 ZNF34Q8IZ26 560 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 CEP70Q8NHQ1 597 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 CABLES2Q9BTV7 478 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 MCRIP2Q9BUT9 160 aaKnown RBP2.54□□□□□ -2
CCDC93-209ENST00000488908 SMYD2Q9NRG4 433 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 CD207Q9UJ71 328 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 DLGAP4Q9Y2H0 992 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 OR2W1Q9Y3N9 320 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 ADAMTS9Q9P2N4 1935 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 CBY3A6NI87 242 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 A8MU10 97 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 E7EVH7 732 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 H0Y3Z8 333 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 PRKNO60260 465 aaPredicted RBP2.53□□□□□ -2
CCDC93-209ENST00000488908 CIDEAO60543 219 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 PRG2P13727 222 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 CORO1AP31146 461 aaKnown RBP2.53□□□□□ -2
CCDC93-209ENST00000488908 BLKP51451 505 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 PDE1BQ01064 536 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 BTKQ06187 659 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 SMAD1Q15797 465 aaKnown RBP2.53□□□□□ -2
CCDC93-209ENST00000488908 KRT24Q2M2I5 525 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 TAOK1Q7L7X3 1001 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 TRPT1Q86TN4 253 aaKnown RBP2.53□□□□□ -2
CCDC93-209ENST00000488908 ZNF527Q8NB42 609 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 MASTLQ96GX5 879 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 FGF22Q9HCT0 170 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 TLR8Q9NR97 1041 aaKnown RBP2.53□□□□□ -2
CCDC93-209ENST00000488908 C2orf42Q9NWW7 574 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 RASAL2Q9UJF2 1139 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 RCOR1Q9UKL0 485 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 DAAM1Q9Y4D1 1078 aa2.53□□□□□ -2
CCDC93-209ENST00000488908 A0A087X002 238 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 ARHGAP10A1A4S6 786 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 SYNGR3O43761 229 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 CHRM4P08173 479 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 EIF2S3P41091 472 aaKnown RBP2.52□□□□□ -2.01
CCDC93-209ENST00000488908 RAD23BP54727 409 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 ISL1P61371 349 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 YWHAZP63104 245 aaKnown RBP2.52□□□□□ -2.01
CCDC93-209ENST00000488908 HLTFQ14527 1009 aaKnown RBP eCLIP2.52□□□□□ -2.01
CCDC93-209ENST00000488908 ZNF234Q14588 700 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 PFKFB4Q16877 469 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 CCDC96Q2M329 555 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 GGT6Q6P531 493 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 TMTC1Q8IUR5 882 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 MOCOSQ96EN8 888 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 RNFT2Q96EX2 444 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 SGCZQ96LD1 299 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 ZNF570Q96NI8 536 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 PRR34Q9NV39 138 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 INTS10Q9NVR2 710 aaKnown RBP2.52□□□□□ -2.01
CCDC93-209ENST00000488908 CDC23Q9UJX2 597 aa2.52□□□□□ -2.01
CCDC93-209ENST00000488908 MRPS28Q9Y2Q9 187 aaKnown RBP2.52□□□□□ -2.01
CCDC93-209ENST00000488908 E9PQ18 207 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 RTL8CO15255 209 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 KLK8O60259 260 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 SKAP2O75563 359 aaPredicted RBP2.51□□□□□ -2.01
CCDC93-209ENST00000488908 KRT38O76015 456 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 EGFP01133 1207 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 CD48P09326 243 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 G6PDP11413 515 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 PPM1AP35813 382 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 HNRNPH2P55795 449 aaKnown RBP2.51□□□□□ -2.01
CCDC93-209ENST00000488908 RUNX1T1Q06455 604 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 LIN54Q6MZP7 749 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 FAM171BQ6P995 826 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 KCTD18Q6PI47 426 aaPredicted RBP2.51□□□□□ -2.01
CCDC93-209ENST00000488908 RBMS3Q6XE24 437 aaKnown RBP2.51□□□□□ -2.01
CCDC93-209ENST00000488908 MTSS1LQ765P7 747 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 CPXM2Q8N436 756 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 DDHD1Q8NEL9 900 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 LINS1Q8NG48 757 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 OR6Y1Q8NGX8 325 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 GOLGA1Q92805 767 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 RBM17Q96I25 401 aaKnown RBP2.51□□□□□ -2.01
CCDC93-209ENST00000488908 NEURL2Q9BR09 285 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 MXRA8Q9BRK3 442 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 ARFGAP3Q9NP61 516 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 G6PC2Q9NQR9 355 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 BARHL2Q9NY43 387 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 KLHL42Q9P2K6 505 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 CACNG5Q9UF02 275 aa2.51□□□□□ -2.01
CCDC93-209ENST00000488908 C17orf113A0A1B0GUU1 675 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms