RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 HTRA1Q92743 480 aa4.48□□□□□ -1.69
ITGB1-214ENST00000488427 APOPT1Q96IL0 206 aa4.48□□□□□ -1.69
ITGB1-214ENST00000488427 LRFN5Q96NI6 719 aa4.48□□□□□ -1.69
ITGB1-214ENST00000488427 CLSTN3Q9BQT9 956 aa4.48□□□□□ -1.69
ITGB1-214ENST00000488427 SLC25A33Q9BSK2 321 aa4.48□□□□□ -1.69
ITGB1-214ENST00000488427 PHF7Q9BWX1 381 aaPredicted RBP4.48□□□□□ -1.69
ITGB1-214ENST00000488427 PDCL3Q9H2J4 239 aa4.48□□□□□ -1.69
ITGB1-214ENST00000488427 RANBP17Q9H2T7 1088 aaKnown RBP4.48□□□□□ -1.69
ITGB1-214ENST00000488427 SNTG1Q9NSN8 517 aa4.48□□□□□ -1.69
ITGB1-214ENST00000488427 KCND2Q9NZV8 630 aa4.48□□□□□ -1.69
ITGB1-214ENST00000488427 SLC25A10Q9UBX3 287 aaPredicted RBP4.48□□□□□ -1.69
ITGB1-214ENST00000488427 AGO1Q9UL18 857 aaKnown RBP4.48□□□□□ -1.69
ITGB1-214ENST00000488427 FAM96BQ9Y3D0 163 aa4.48□□□□□ -1.69
ITGB1-214ENST00000488427 MTUS2Q5JR59 1369 aa4.48□□□□□ -1.69
ITGB1-214ENST00000488427 TUBGCP6Q96RT7 1819 aa4.48□□□□□ -1.69
ITGB1-214ENST00000488427 RRBP1Q9P2E9 1410 aaKnown RBP4.47□□□□□ -1.69
ITGB1-214ENST00000488427 PARP4Q9UKK3 1724 aaKnown RBP4.47□□□□□ -1.69
ITGB1-214ENST00000488427 CKAP5Q14008 2032 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 DENND3A2RUS2 1198 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 CREB3O43889 395 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 CH25HO95992 272 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 GALTP07902 379 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 HOXB5P09067 269 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 ACAA1P09110 424 aaPredicted RBP4.47□□□□□ -1.69
ITGB1-214ENST00000488427 CD72P21854 359 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 RYKP34925 604 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 THPOP40225 353 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 CLCN5P51795 746 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 PMS2P54278 862 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 EIF3BP55884 814 aaKnown RBP4.47□□□□□ -1.69
ITGB1-214ENST00000488427 NANOS2P60321 138 aaKnown RBP4.47□□□□□ -1.69
ITGB1-214ENST00000488427 ABATP80404 500 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 TCTN1Q2MV58 587 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 PPP6R3Q5H9R7 873 aaPredicted RBP4.47□□□□□ -1.69
ITGB1-214ENST00000488427 NADSYN1Q6IA69 706 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 KIAA2013Q8IYS2 634 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 TCP11L2Q8N4U5 519 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 ESX1Q8N693 406 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 GJC3Q8NFK1 279 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 NFKBIDQ8NI38 313 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 FBXL8Q96CD0 374 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 ELP4Q96EB1 424 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 OR1F2PQ96R84 312 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 BBS4Q96RK4 519 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 MSTO1Q9BUK6 570 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 C6orf106Q9H6K1 298 aaPredicted RBP4.47□□□□□ -1.69
ITGB1-214ENST00000488427 BPIFA1Q9NP55 256 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 CYSLTR2Q9NS75 346 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 OR6C3Q9NZP0 311 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 CFDP1Q9UEE9 299 aaPredicted RBP4.47□□□□□ -1.69
ITGB1-214ENST00000488427 ARHGAP26Q9UNA1 814 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 TMEM98Q9Y2Y6 226 aa4.47□□□□□ -1.69
ITGB1-214ENST00000488427 LMTK2Q8IWU2 1503 aa4.46□□□□□ -1.69
ITGB1-214ENST00000488427 PEAK1Q9H792 1746 aa4.46□□□□□ -1.69
ITGB1-214ENST00000488427 KIF1AQ12756 1690 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 ARHGEF5Q12774 1597 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 CCDC18Q5T9S5 1454 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 MBD5Q9P267 1494 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 LRPPRCP42704 1394 aaKnown RBP4.46□□□□□ -1.7
ITGB1-214ENST00000488427 CBY3A6NI87 242 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 WNT9BO14905 357 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 VNN2O95498 520 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 MT-CYBP00156 380 aaPredicted RBP4.46□□□□□ -1.7
ITGB1-214ENST00000488427 FGF3P11487 239 aaPredicted RBP4.46□□□□□ -1.7
ITGB1-214ENST00000488427 DDX5P17844 614 aaKnown RBP4.46□□□□□ -1.7
ITGB1-214ENST00000488427 SRD5A1P18405 259 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 ABCD1P33897 745 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 ART1P52961 327 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 UFM1P61960 85 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 GALNT2Q10471 571 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 PPP2R5BQ15173 497 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 CAPRIN2Q6IMN6 1127 aaKnown RBP4.46□□□□□ -1.7
ITGB1-214ENST00000488427 CRELD2Q6UXH1 353 aaPredicted RBP4.46□□□□□ -1.7
ITGB1-214ENST00000488427 MMS22LQ6ZRQ5 1243 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 MOB3CQ70IA8 216 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 NEUROG1Q92886 237 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 KLHL29Q96CT2 875 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 RTP4Q96DX8 246 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 RNF125Q96EQ8 232 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 ZNF570Q96NI8 536 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 MXRA8Q9BRK3 442 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 UNC45AQ9H3U1 944 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 PRKRIP1Q9H875 184 aaPredicted RBP4.46□□□□□ -1.7
ITGB1-214ENST00000488427 CICQ96RK0 1608 aaPredicted RBP4.46□□□□□ -1.7
ITGB1-214ENST00000488427 TRIOBPQ9H2D6 2365 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 UTYO14607 1347 aa4.46□□□□□ -1.7
ITGB1-214ENST00000488427 ATXN2Q99700 1313 aaKnown RBP4.46□□□□□ -1.7
ITGB1-214ENST00000488427 CCDC141Q6ZP82 1450 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 EVPLQ92817 2033 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 A0A0U1RQJ8 604 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 LRRC53A6NM62 1247 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 KLRF2D3W0D1 207 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 TIPRLO75663 272 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 URODP06132 367 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 HEXAP06865 529 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 CCKBRP32239 447 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 MXI1P50539 228 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 NEXNQ0ZGT2 675 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 KEAP1Q14145 624 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 CTTNQ14247 550 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms