RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 USP45Q70EL2 814 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 EFL1Q7Z2Z2 1120 aaKnown RBP11.46□□□□□ -0.57
SPEN-205ENST00000487496 CCDC170Q8IYT3 715 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 NDUFAF2Q8N183 169 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 SDR16C5Q8N3Y7 309 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 CNTD1Q8N815 330 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 OR56A4Q8NGH8 313 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 IFI44Q8TCB0 444 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 OR1E3Q8WZA6 343 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 NUS1Q96E22 293 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 DTD2Q96FN9 168 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 PDXPQ96GD0 296 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 MRFAP1L1Q96HT8 127 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 SMIM14Q96QK8 99 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 ANP32EQ9BTT0 268 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 LGR4Q9BXB1 951 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 WDR26Q9H7D7 661 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 DDX56Q9NY93 547 aaKnown RBP11.46□□□□□ -0.57
SPEN-205ENST00000487496 TFR2Q9UP52 801 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 PCDHA13Q9Y5I0 950 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 ALG6Q9Y672 507 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 DGKBQ9Y6T7 804 aa11.46□□□□□ -0.57
SPEN-205ENST00000487496 SHROOM3Q8TF72 1996 aa11.46□□□□□ -0.58
SPEN-205ENST00000487496 A0A0U1RQS6 177 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 CPED1A4D0V7 1026 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 PDE2AO00408 941 aaPredicted RBP11.45□□□□□ -0.58
SPEN-205ENST00000487496 TNFRSF10CO14798 259 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 PRLP01236 227 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 TNFP01375 233 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 KRT10P13645 584 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 ZFXP17010 805 aaPredicted RBP11.45□□□□□ -0.58
SPEN-205ENST00000487496 KELP23276 732 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 RPIAP49247 311 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 IFI35P80217 286 aaPredicted RBP11.45□□□□□ -0.58
SPEN-205ENST00000487496 ZBTB17Q13105 803 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 PDK1Q15118 436 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 NR0B2Q15466 257 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 SPA17Q15506 151 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 ODF2Q5BJF6 829 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 CDCP2Q5VXM1 449 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 LRRC66Q68CR7 880 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 LVRNQ6Q4G3 990 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 CRTC1Q6UUV9 634 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 MFSD7Q6UXD7 560 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 NPNTQ6UXI9 565 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 TECPR1Q7Z6L1 1165 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 GAS2L3Q86XJ1 694 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 RFX6Q8HWS3 928 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 SLC35F3Q8IY50 421 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 MAPK15Q8TD08 544 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 SCG3Q8WXD2 468 aaKnown RBP11.45□□□□□ -0.58
SPEN-205ENST00000487496 GLMNQ92990 594 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 NXPE2Q96DL1 559 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 OLFM3Q96PB7 478 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 PANX2Q96RD6 677 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 RBM15Q96T37 977 aaKnown RBP eCLIP11.45□□□□□ -0.58
SPEN-205ENST00000487496 TDRD1Q9BXT4 1180 aaKnown RBP11.45□□□□□ -0.58
SPEN-205ENST00000487496 NRSN2Q9GZP1 204 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 ABCG4Q9H172 646 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 GOLPH3Q9H4A6 298 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 FGF22Q9HCT0 170 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 MRPL40Q9NQ50 206 aaKnown RBP11.45□□□□□ -0.58
SPEN-205ENST00000487496 DOLKQ9UPQ8 538 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 CHKBQ9Y259 395 aa11.45□□□□□ -0.58
SPEN-205ENST00000487496 EPN1Q9Y6I3 576 aaPredicted RBP11.45□□□□□ -0.58
SPEN-205ENST00000487496 A0A0A6YYK5 440 aaPredicted RBP11.44□□□□□ -0.58
SPEN-205ENST00000487496 PSTPIP1O43586 416 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 MMP2P08253 660 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 MYCLP1P12525 358 aaPredicted RBP11.44□□□□□ -0.58
SPEN-205ENST00000487496 TGM2P21980 687 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 CA4P22748 312 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 CYLC1P35663 651 aaPredicted RBP11.44□□□□□ -0.58
SPEN-205ENST00000487496 CD86P42081 329 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 CDKN2BP42772 138 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 EPHB1P54762 984 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 DYNLT1P63172 113 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 SKOR1P84550 965 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 PTSQ03393 145 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 DPTQ07507 201 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 AP1B1Q10567 949 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 RTP5Q14D33 572 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 TAZQ16635 292 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 FAM182AQ5T1J6 154 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 RFLNAQ6ZTI6 216 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 HEATR4Q86WZ0 1026 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 GKN2Q86XP6 184 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 TMTC1Q8IUR5 882 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 TEX101Q9BY14 249 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 BRD8Q9H0E9 1235 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 ABCG8Q9H221 673 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 PCDH9Q9HC56 1237 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 LUC7LQ9NQ29 371 aaKnown RBP11.44□□□□□ -0.58
SPEN-205ENST00000487496 PHPT1Q9NRX4 125 aaPredicted RBP11.44□□□□□ -0.58
SPEN-205ENST00000487496 GULP1Q9UBP9 304 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 RAXQ9Y2V3 346 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 APC2O95996 2303 aa11.44□□□□□ -0.58
SPEN-205ENST00000487496 CAPN8A6NHC0 703 aa11.43□□□□□ -0.58
SPEN-205ENST00000487496 SOWAHDA6NJG2 315 aa11.43□□□□□ -0.58
SPEN-205ENST00000487496 PPP1R12AO14974 1030 aaPredicted RBP11.43□□□□□ -0.58
SPEN-205ENST00000487496 NDUFA10O95299 355 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms