RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 ZFP36L1Q07352 338 aaKnown RBP12.21□□□□□ -0.45
VPS16-208ENST00000487461 TRAF2Q12933 501 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 HLTFQ14527 1009 aaKnown RBP eCLIP12.21□□□□□ -0.45
VPS16-208ENST00000487461 ZNF235Q14590 738 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 C14orf28Q4W4Y0 310 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 CERCAMQ5T4B2 595 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 DENND2CQ68D51 928 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 SPECC1LQ69YQ0 1117 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 INO80CQ6PI98 192 aaPredicted RBP12.21□□□□□ -0.45
VPS16-208ENST00000487461 HSD11B1LQ7Z5J1 315 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 NRROSQ86YC3 692 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 CCNJLQ8IV13 435 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 TTC9Q92623 222 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 NUS1Q96E22 293 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 WBP1Q96G27 269 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 TMEM74Q96NL1 305 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 MGME1Q9BQP7 344 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 TEX101Q9BY14 249 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 DPEP2Q9H4A9 486 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 WDR26Q9H7D7 661 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 PCDH18Q9HCL0 1135 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 SPATS2LQ9NUQ6 558 aaKnown RBP12.21□□□□□ -0.45
VPS16-208ENST00000487461 LRIT1Q9P2V4 623 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 PHTF1Q9UMS5 762 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 PCDHGA7Q9Y5G6 932 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 HELZ2Q9BYK8 2649 aaKnown RBP12.21□□□□□ -0.46
VPS16-208ENST00000487461 ANKRD36A6QL64 1941 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 LRP4O75096 1905 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 A0A0U1RQS6 177 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 A0A1W2PQ67 120 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 PRSS38A1L453 326 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 B4DGG1 531 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 AGRPO00253 132 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 PDE2AO00408 941 aaPredicted RBP12.2□□□□□ -0.46
VPS16-208ENST00000487461 B4GAT1O43505 415 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 SOCS5O75159 536 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 CPP00450 1065 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 SERPINC1P01008 464 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 FGF1P05230 155 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 CEACAM5P06731 702 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 MYCLP1P12525 358 aaPredicted RBP12.2□□□□□ -0.46
VPS16-208ENST00000487461 PNLIPP16233 465 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 LHCGRP22888 699 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 IL4RP24394 825 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 CCKBRP32239 447 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 ETV3P41162 512 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 B4GALNT1Q00973 533 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 SLC25A11Q02978 314 aaKnown RBP12.2□□□□□ -0.46
VPS16-208ENST00000487461 EIF3IQ13347 325 aaKnown RBP12.2□□□□□ -0.46
VPS16-208ENST00000487461 PIGHQ14442 188 aaPredicted RBP12.2□□□□□ -0.46
VPS16-208ENST00000487461 FIGNQ5HY92 759 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 MARC1Q5VT66 337 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 CAVIN1Q6NZI2 390 aaKnown RBP12.2□□□□□ -0.46
VPS16-208ENST00000487461 Q6ZVL8 140 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 TMPRSS9Q7Z410 1059 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 SPRED1Q7Z699 444 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 TSPAN33Q86UF1 283 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 GPBAR1Q8TDU6 330 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 PTCD2Q8WV60 388 aaKnown RBP12.2□□□□□ -0.46
VPS16-208ENST00000487461 TEKT4Q8WW24 435 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 PIH1D2Q8WWB5 315 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 SCRN2Q96FV2 425 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 FUCA2Q9BTY2 467 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 SEMA4CQ9C0C4 833 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 STRADBQ9C0K7 418 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 THAP2Q9H0W7 228 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 CARS2Q9HA77 564 aaKnown RBP12.2□□□□□ -0.46
VPS16-208ENST00000487461 AHCTF1Q8WYP5 2266 aa12.2□□□□□ -0.46
VPS16-208ENST00000487461 KALRNO60229 2985 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 ARHGEF17Q96PE2 2063 aaPredicted RBP12.19□□□□□ -0.46
VPS16-208ENST00000487461 NPIPB15A6NHN6 443 aaPredicted RBP12.19□□□□□ -0.46
VPS16-208ENST00000487461 PGLSO95336 258 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 CYP1A2P05177 515 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 CYP2A6P11509 494 aaPredicted RBP12.19□□□□□ -0.46
VPS16-208ENST00000487461 PLA2G2AP14555 144 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 CCNB1P14635 433 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 CTPS1P17812 591 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 PBX1P40424 430 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 MMP13P45452 471 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 POLD2P49005 469 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 MAZP56270 477 aaKnown RBP12.19□□□□□ -0.46
VPS16-208ENST00000487461 MMRN1Q13201 1228 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 ARHGEF7Q14155 803 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 LY6DQ14210 128 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 IHHQ14623 411 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 TSR1Q2NL82 804 aaKnown RBP12.19□□□□□ -0.46
VPS16-208ENST00000487461 ZSCAN23Q3MJ62 389 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 TDRD12Q587J7 1177 aaKnown RBP12.19□□□□□ -0.46
VPS16-208ENST00000487461 RALGPS1Q5JS13 557 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 KIAA1614Q5VZ46 1190 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 CCDC81Q6ZN84 652 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 RFLNAQ6ZTI6 216 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 TECPR1Q7Z6L1 1165 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 ZNF605Q86T29 641 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 HEATR4Q86WZ0 1026 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 C17orf82Q86X59 251 aaPredicted RBP12.19□□□□□ -0.46
VPS16-208ENST00000487461 JAMLQ86YT9 394 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 BBS5Q8N3I7 341 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 ATPAF2Q8N5M1 289 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 TEX26Q8N6G2 289 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms