RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SLC38A8A6NNN8 435 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 LDB2O43679 373 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 DNAJA2O60884 412 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 VNN2O95498 520 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 S1PR4O95977 384 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 HNRNPLP14866 589 aaKnown RBP eCLIP26.15■■□□□ 1.78
HLA-C-208ENST00000487245 KCNA5P22460 613 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 ETFBP38117 255 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 HSPA13P48723 471 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 PSME3P61289 254 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 IHHQ14623 411 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 NADSYN1Q6IA69 706 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 DBF4BQ8NFT6 615 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 GPR150Q8NGU9 434 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 USP13Q92995 863 aaPredicted RBP26.15■■□□□ 1.78
HLA-C-208ENST00000487245 ASB9Q96DX5 294 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 B3GALT6Q96L58 329 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 NDNQ99608 321 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 NPAS2Q99743 824 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 UNC93B1Q9H1C4 597 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 PCDHGA7Q9Y5G6 932 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 CCDC166P0CW27 439 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 IMPDH1P20839 514 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 ACVRL1P37023 503 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 DUSP4Q13115 394 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 TLR1Q15399 786 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 CNPY1Q3B7I2 92 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 HACD2Q6Y1H2 254 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 HMGCLL1Q8TB92 370 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 GCNAQ96QF7 691 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 TTPALQ9BTX7 342 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 UNKQ9C0B0 810 aaKnown RBP26.15■■□□□ 1.78
HLA-C-208ENST00000487245 CRISPLD1Q9H336 500 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 SUDS3Q9H7L9 328 aaPredicted RBP26.15■■□□□ 1.78
HLA-C-208ENST00000487245 TRPC7Q9HCX4 862 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 DNMT3LQ9UJW3 386 aa26.15■■□□□ 1.78
HLA-C-208ENST00000487245 EME2A4GXA9 379 aaPredicted RBP26.14■■□□□ 1.78
HLA-C-208ENST00000487245 NBNO60934 754 aa26.14■■□□□ 1.78
HLA-C-208ENST00000487245 NFKB2Q00653 900 aa26.14■■□□□ 1.78
HLA-C-208ENST00000487245 LRP8Q14114 963 aa26.14■■□□□ 1.78
HLA-C-208ENST00000487245 ALG1LQ6GMV1 187 aa26.14■■□□□ 1.78
HLA-C-208ENST00000487245 RSPO2Q6UXX9 243 aaPredicted RBP26.14■■□□□ 1.78
HLA-C-208ENST00000487245 GK5Q6ZS86 529 aa26.14■■□□□ 1.78
HLA-C-208ENST00000487245 CIR1Q86X95 450 aaPredicted RBP26.14■■□□□ 1.78
HLA-C-208ENST00000487245 NPAS4Q8IUM7 802 aa26.14■■□□□ 1.78
HLA-C-208ENST00000487245 LGI2Q8N0V4 545 aa26.14■■□□□ 1.78
HLA-C-208ENST00000487245 GSTO2Q9H4Y5 243 aa26.14■■□□□ 1.78
HLA-C-208ENST00000487245 CCSER2Q9H7U1 834 aa26.14■■□□□ 1.78
HLA-C-208ENST00000487245 HMX1Q9NP08 348 aaPredicted RBP26.14■■□□□ 1.78
HLA-C-208ENST00000487245 PHF24Q9UPV7 400 aa26.14■■□□□ 1.78
HLA-C-208ENST00000487245 C15orf38-AP3S2A0A0A6YYH1 394 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 SMIM31A0A1B0GVY4 71 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 UBDO15205 165 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 ACSL4O60488 711 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 C8BP07358 591 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 TRAP1Q12931 704 aaKnown RBP26.13■■□□□ 1.77
HLA-C-208ENST00000487245 MRNIPQ6NTE8 343 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 ARPINQ7Z6K5 226 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 LILRA2Q8N149 483 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 CD99L2Q8TCZ2 262 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 BRSK1Q8TDC3 778 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 OVCA2Q8WZ82 227 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 DUS3LQ96G46 650 aaKnown RBP26.13■■□□□ 1.77
HLA-C-208ENST00000487245 TRIM4Q9C037 500 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 PDFQ9HBH1 243 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP26.13■■□□□ 1.77
HLA-C-208ENST00000487245 EPS15L1Q9UBC2 864 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 H0YJX3 145 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 STX16-NPEPL1H3BU86 382 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 PSMD12O00232 456 aaPredicted RBP26.13■■□□□ 1.77
HLA-C-208ENST00000487245 TXNDC9O14530 226 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 GLP2RO95838 553 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 GALTP07902 379 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 SERPINF2P08697 491 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 ATP5C1P36542 298 aaKnown RBP26.13■■□□□ 1.77
HLA-C-208ENST00000487245 ARSDP51689 593 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 RTP2Q5QGT7 225 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 RNF135Q8IUD6 432 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 TMEM102Q8N9M5 508 aaPredicted RBP26.13■■□□□ 1.77
HLA-C-208ENST00000487245 PDZD8Q8NEN9 1154 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 TMA16Q96EY4 203 aaKnown RBP26.13■■□□□ 1.77
HLA-C-208ENST00000487245 PLK2Q9NYY3 685 aa26.13■■□□□ 1.77
HLA-C-208ENST00000487245 TRIM24O15164 1050 aa26.12■■□□□ 1.77
HLA-C-208ENST00000487245 GNRH1P01148 92 aa26.12■■□□□ 1.77
HLA-C-208ENST00000487245 GRIA2P42262 883 aa26.12■■□□□ 1.77
HLA-C-208ENST00000487245 SLC11A2P49281 568 aa26.12■■□□□ 1.77
HLA-C-208ENST00000487245 POLE2P56282 527 aa26.12■■□□□ 1.77
HLA-C-208ENST00000487245 C1QTNF8P60827 252 aa26.12■■□□□ 1.77
HLA-C-208ENST00000487245 TRIM25Q14258 630 aaKnown RBP26.12■■□□□ 1.77
HLA-C-208ENST00000487245 FASTKQ14296 549 aaKnown RBP26.12■■□□□ 1.77
HLA-C-208ENST00000487245 GIPC2Q8TF65 315 aa26.12■■□□□ 1.77
HLA-C-208ENST00000487245 KLHL32Q96NJ5 620 aa26.12■■□□□ 1.77
HLA-C-208ENST00000487245 CFHR5Q9BXR6 569 aa26.12■■□□□ 1.77
HLA-C-208ENST00000487245 CYP4F12Q9HCS2 524 aa26.12■■□□□ 1.77
HLA-C-208ENST00000487245 CACNA2D2Q9NY47 1150 aa26.12■■□□□ 1.77
HLA-C-208ENST00000487245 TTC24A2A3L6 582 aaPredicted RBP26.11■■□□□ 1.77
HLA-C-208ENST00000487245 RPP40O75818 363 aaKnown RBP26.11■■□□□ 1.77
HLA-C-208ENST00000487245 CRTAMO95727 393 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 REP15Q6BDI9 236 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 ANKRD49Q8WVL7 239 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms