RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 BLKP51451 505 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 STC1P52823 247 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 GALNT3Q14435 633 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 OASLQ15646 514 aaKnown RBP14.65□□□□□ -0.06
LIMS3-205ENST00000487150 RSPO4Q2I0M5 234 aaPredicted RBP14.65□□□□□ -0.06
LIMS3-205ENST00000487150 WSCD2Q2TBF2 565 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 KDELC1Q6UW63 502 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 LAYNQ6UX15 382 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 MACC1Q6ZN28 852 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 RASGEF1CQ8N431 466 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 IPMKQ8NFU5 416 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 CCDC110Q8TBZ0 833 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 ATG4AQ8WYN0 398 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 NAPGQ99747 312 aaPredicted RBP14.65□□□□□ -0.06
LIMS3-205ENST00000487150 WDR26Q9H7D7 661 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 LRRC40Q9H9A6 602 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 ZFYVE1Q9HBF4 777 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 TM7SF3Q9NS93 570 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 DLL3Q9NYJ7 618 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 PYCARDQ9ULZ3 195 aa14.65□□□□□ -0.06
LIMS3-205ENST00000487150 R3HDM2Q9Y2K5 976 aaKnown RBP14.65□□□□□ -0.06
LIMS3-205ENST00000487150 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.65□□□□□ -0.06
LIMS3-205ENST00000487150 SPTY2D1-AS1A0A0U1RR47 76 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 A0A1B0GTQ1 180 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 LOC285095A0A1B0GVY8 99 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 TCRBV7S2A1N4TA0A589 114 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 CTAGE9A4FU28 777 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 H0Y8X5 98 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 GDF9O60383 454 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 PPFIA2O75334 1257 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 GAS8O95995 478 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 PCCBP05166 539 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 HOXC4P09017 264 aaPredicted RBP14.64□□□□□ -0.07
LIMS3-205ENST00000487150 ALPIP09923 528 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 ITIH2P19823 946 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 PSMB4P28070 264 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 CXCR5P32302 372 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 FDFT1P37268 417 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 GRK6P43250 576 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 CLDN2P57739 230 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 KIAA1024LP59773 190 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 DCDC1P59894 354 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 HNRNPKP61978 463 aaKnown RBP eCLIP14.64□□□□□ -0.07
LIMS3-205ENST00000487150 PDE1BQ01064 536 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 DPTQ07507 201 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 UAP1L1Q3KQV9 507 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 HS1BP3Q53T59 392 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 CRTC1Q6UUV9 634 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 NLRP8Q86W28 1048 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 ACTRT1Q8TDG2 376 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 BTN2A2Q8WVV5 523 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 OXNAD1Q96HP4 312 aaPredicted RBP14.64□□□□□ -0.07
LIMS3-205ENST00000487150 BMFQ96LC9 184 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 TBATAQ96M53 351 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 OSBPL9Q96SU4 736 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 FSCN3Q9NQT6 498 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 RXFP3Q9NSD7 469 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 UBP1Q9NZI7 540 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.64□□□□□ -0.07
LIMS3-205ENST00000487150 PAK5Q9P286 719 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 DRG1Q9Y295 367 aaKnown RBP14.64□□□□□ -0.07
LIMS3-205ENST00000487150 FNDC3AQ9Y2H6 1198 aaKnown RBP14.64□□□□□ -0.07
LIMS3-205ENST00000487150 COQ6Q9Y2Z9 468 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 ZNF711Q9Y462 761 aa14.64□□□□□ -0.07
LIMS3-205ENST00000487150 POM121BA6NF01 834 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 A8MX80 341 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 IFNB1P01574 187 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 ATP1A1P05023 1023 aaKnown RBP14.63□□□□□ -0.07
LIMS3-205ENST00000487150 CSRP1P21291 193 aaKnown RBP14.63□□□□□ -0.07
LIMS3-205ENST00000487150 ID4P47928 161 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 BNC1Q01954 994 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 PDE1CQ14123 709 aaPredicted RBP14.63□□□□□ -0.07
LIMS3-205ENST00000487150 NFATC4Q14934 902 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 SLC1A5Q15758 541 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 DENND2CQ68D51 928 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 GSTA5Q7RTV2 222 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 KDELC2Q7Z4H8 507 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 LINC00523Q86TU6 105 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 TSPAN33Q86UF1 283 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 KLHDC8BQ8IXV7 354 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 CBARPQ8N350 705 aaPredicted RBP14.63□□□□□ -0.07
LIMS3-205ENST00000487150 C1orf54Q8WWF1 131 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 TRIM44Q96DX7 344 aaPredicted RBP14.63□□□□□ -0.07
LIMS3-205ENST00000487150 MRGPRX2Q96LB1 330 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 GPR63Q9BZJ6 419 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 PHPT1Q9NRX4 125 aaPredicted RBP14.63□□□□□ -0.07
LIMS3-205ENST00000487150 NFKBIL1Q9UBC1 381 aaPredicted RBP14.63□□□□□ -0.07
LIMS3-205ENST00000487150 CA5BQ9Y2D0 317 aa14.63□□□□□ -0.07
LIMS3-205ENST00000487150 FRYLO94915 3013 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 NEMP2A6NFY4 417 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 USP27XA6NNY8 438 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 E7EVH7 732 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 AP3B1O00203 1094 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 MYCLP1P12525 358 aaPredicted RBP14.62□□□□□ -0.07
LIMS3-205ENST00000487150 NME1P15531 152 aaKnown RBP14.62□□□□□ -0.07
LIMS3-205ENST00000487150 EPHA8P29322 1005 aaPredicted RBP14.62□□□□□ -0.07
LIMS3-205ENST00000487150 ETV3P41162 512 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 IHHQ14623 411 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 INPP5AQ14642 412 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 CACNA1EQ15878 2313 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms