RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 ITPR1Q14643 2758 aa19.11■□□□□ 0.65
CLIP2-206ENST00000487091 NBEAQ8NFP9 2946 aa19.11■□□□□ 0.65
CLIP2-206ENST00000487091 NPIPB15A6NHN6 443 aaPredicted RBP19.1■□□□□ 0.65
CLIP2-206ENST00000487091 ZNF487B1APH4 448 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 USP12O75317 370 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 DXOO77932 396 aaKnown RBP19.1■□□□□ 0.65
CLIP2-206ENST00000487091 LHCGRP22888 699 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 KDELR1P24390 212 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 TEAD1P28347 426 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 LSSP48449 732 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 ITKQ08881 620 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 ARHGEF7Q14155 803 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 MESDQ14696 234 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 TBC1D25Q3MII6 688 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 KCTD16Q68DU8 428 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 RBM44Q6ZP01 1051 aaKnown RBP19.1■□□□□ 0.65
CLIP2-206ENST00000487091 NYAP1Q6ZVC0 841 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 PDZD3Q86UT5 571 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 VSIG1Q86XK7 387 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 RHOT2Q8IXI1 618 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 PELI3Q8N2H9 469 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 OR6C4Q8NGE1 309 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 DTD2Q96FN9 168 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 DCBLD2Q96PD2 775 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 LGR4Q9BXB1 951 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 NHEJ1Q9H9Q4 299 aaPredicted RBP19.1■□□□□ 0.65
CLIP2-206ENST00000487091 RBM22Q9NW64 420 aaKnown RBP eCLIP19.1■□□□□ 0.652e-6■■■□□ 17.9
CLIP2-206ENST00000487091 GPR34Q9UPC5 381 aa19.1■□□□□ 0.65
CLIP2-206ENST00000487091 COL27A1Q8IZC6 1860 aaPredicted RBP19.09■□□□□ 0.65
CLIP2-206ENST00000487091 RRP8O43159 456 aaKnown RBP19.09■□□□□ 0.65
CLIP2-206ENST00000487091 MTA2O94776 668 aa19.09■□□□□ 0.65
CLIP2-206ENST00000487091 PDHA1P08559 390 aa19.09■□□□□ 0.65
CLIP2-206ENST00000487091 MYCLP1P12525 358 aaPredicted RBP19.09■□□□□ 0.65
CLIP2-206ENST00000487091 CCNB1P14635 433 aa19.09■□□□□ 0.65
CLIP2-206ENST00000487091 GBE1Q04446 702 aa19.09■□□□□ 0.65
CLIP2-206ENST00000487091 ZFYVE27Q5T4F4 411 aa19.09■□□□□ 0.65
CLIP2-206ENST00000487091 OGFOD3Q6PK18 319 aa19.09■□□□□ 0.65
CLIP2-206ENST00000487091 LRRC69Q6ZNQ3 347 aa19.09■□□□□ 0.65
CLIP2-206ENST00000487091 HSD11B1LQ7Z5J1 315 aa19.09■□□□□ 0.65
CLIP2-206ENST00000487091 RAPGEF5Q92565 580 aa19.09■□□□□ 0.65
CLIP2-206ENST00000487091 HDAC11Q96DB2 347 aa19.09■□□□□ 0.65
CLIP2-206ENST00000487091 ZNF578Q96N58 590 aaPredicted RBP19.09■□□□□ 0.65
CLIP2-206ENST00000487091 RNF157Q96PX1 679 aa19.09■□□□□ 0.65
CLIP2-206ENST00000487091 CCDC3Q9BQI4 270 aa19.09■□□□□ 0.65
CLIP2-206ENST00000487091 TEX101Q9BY14 249 aa19.09■□□□□ 0.65
CLIP2-206ENST00000487091 POLR1BQ9H9Y6 1135 aa19.09■□□□□ 0.65
CLIP2-206ENST00000487091 MRPL40Q9NQ50 206 aaKnown RBP19.09■□□□□ 0.65
CLIP2-206ENST00000487091 PHPT1Q9NRX4 125 aaPredicted RBP19.09■□□□□ 0.65
CLIP2-206ENST00000487091 NTN3O00634 580 aaPredicted RBP19.08■□□□□ 0.64
CLIP2-206ENST00000487091 MAP3K6O95382 1288 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 MPOP05164 745 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 ETV3P41162 512 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 ABCG1P45844 678 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 GABREP78334 506 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 DPTQ07507 201 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 SLC10A2Q12908 348 aaPredicted RBP19.08■□□□□ 0.64
CLIP2-206ENST00000487091 DENND2CQ68D51 928 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 CRTC1Q6UUV9 634 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 Q6ZVL8 140 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 TECPR1Q7Z6L1 1165 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 TAF8Q7Z7C8 310 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 TSPAN33Q86UF1 283 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 CNGA4Q8IV77 575 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 KYQ8NBH2 561 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 RNF214Q8ND24 703 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 GPR156Q8NFN8 814 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 ARRDC2Q8TBH0 407 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 CYP4F12Q9HCS2 524 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 SPTLC3Q9NUV7 552 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 DTLQ9NZJ0 730 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 SIRPGQ9P1W8 387 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 INTUQ9ULD6 942 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 ENTPD2Q9Y5L3 495 aa19.08■□□□□ 0.64
CLIP2-206ENST00000487091 ARHGEF17Q96PE2 2063 aaPredicted RBP19.08■□□□□ 0.64
CLIP2-206ENST00000487091 A0A0J9YYE9 177 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 PRSS38A1L453 326 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 TRBC1P01850 177 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 ZNF30P17039 623 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 CTPS1P17812 591 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 CA4P22748 312 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 EPHB1P54762 984 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 RPL26P61254 145 aaKnown RBP19.07■□□□□ 0.64
CLIP2-206ENST00000487091 DSC2Q02487 901 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 IHHQ14623 411 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 TCEAL1Q15170 157 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 PTPRRQ15256 657 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 TCEA2Q15560 299 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 LRRC38Q5VT99 294 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 IGF2-ASQ6U949 168 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 NLRP8Q86W28 1048 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 HEATR4Q86WZ0 1026 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 RAVER1Q8IY67 606 aaKnown RBP19.07■□□□□ 0.64
CLIP2-206ENST00000487091 CCDC13Q8IYE1 715 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 FAM46DQ8NEK8 389 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 ZNF830Q96NB3 372 aaPredicted RBP19.07■□□□□ 0.64
CLIP2-206ENST00000487091 TDRD1Q9BXT4 1180 aaKnown RBP19.07■□□□□ 0.64
CLIP2-206ENST00000487091 TMEM168Q9H0V1 697 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 DNPEPQ9ULA0 475 aa19.07■□□□□ 0.64
CLIP2-206ENST00000487091 RPL26L1Q9UNX3 145 aaKnown RBP19.07■□□□□ 0.64
CLIP2-206ENST00000487091 LRRD1A4D1F6 860 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms