RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 SDCCAG3Q96C92 435 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 PPM1MQ96MI6 270 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 SLC25A23Q9BV35 468 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 NT5MQ9NPB1 228 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 IGSF5Q9NSI5 407 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 INTS7Q9NVH2 962 aaKnown RBP12.4□□□□□ -0.42
HSPG2-211ENST00000486901 CASTOR2A6NHX0 329 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 HLA-DQB2P05538 268 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 C8BP07358 591 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 NAB1Q13506 487 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 SQLEQ14534 574 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 PAFAH1B3Q15102 231 aaKnown RBP12.4□□□□□ -0.42
HSPG2-211ENST00000486901 PGS1Q32NB8 556 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 ARMCX2Q7L311 632 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 PIWIL4Q7Z3Z4 852 aaKnown RBP12.4□□□□□ -0.42
HSPG2-211ENST00000486901 STK32CQ86UX6 486 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 RIOX2Q8IUF8 465 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 PELI3Q8N2H9 469 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 DHRSXQ8N5I4 330 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 TMCO5AQ8N6Q1 288 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 MRPL57Q9BQC6 102 aaKnown RBP12.4□□□□□ -0.42
HSPG2-211ENST00000486901 DUSP16Q9BY84 665 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 ANKRD60Q9BZ19 345 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 DNAJC15Q9Y5T4 150 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 ZFC3H1O60293 1989 aaKnown RBP12.4□□□□□ -0.43
HSPG2-211ENST00000486901 TCRBV3S1A0A5B6 114 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 HMOX2P30519 316 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 LILRA4P59901 499 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 Q6ZNX1 250 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 PDZD4Q76G19 769 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-211ENST00000486901 ITIH5Q86UX2 942 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 CAMK1DQ8IU85 385 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 RDH11Q8TC12 318 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 PTERQ96BW5 349 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 SMURF2Q9HAU4 748 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 IFT80Q9P2H3 777 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-211ENST00000486901 VPS51Q9UID3 782 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 UTS2RQ9UKP6 389 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 NOL3O60936 208 aaKnown RBP12.39□□□□□ -0.43
HSPG2-211ENST00000486901 APOA4P06727 396 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 SETSIPP0DME0 302 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 NPY2RP49146 381 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 MTPNP58546 118 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 SPIDRQ14159 915 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 UGT3A2Q3SY77 523 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 PAGE3Q5JUK9 113 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 PCID2Q5JVF3 399 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 SLC7A5P1Q8MH63 180 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 PAF1Q8N7H5 531 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 BLOC1S5Q8TDH9 187 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 PCED1BQ96HM7 432 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 SNX27Q96L92 541 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 SARS2Q9NP81 518 aaKnown RBP12.39□□□□□ -0.43
HSPG2-211ENST00000486901 CD300AQ9UGN4 299 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 TRIM17Q9Y577 477 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 PCDHGA4Q9Y5G9 962 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 GMEB1Q9Y692 573 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 SYNCRIPO60506 623 aaKnown RBP12.39□□□□□ -0.43
HSPG2-211ENST00000486901 USP2O75604 605 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-211ENST00000486901 NFKBIAP25963 317 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 TAF6P49848 677 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 YWHAHQ04917 246 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-211ENST00000486901 DGCR6Q14129 220 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 TWF2Q6IBS0 349 aaKnown RBP12.39□□□□□ -0.43
HSPG2-211ENST00000486901 PPP4R4Q6NUP7 873 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 DCDC5Q6ZRR9 648 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 TAC4Q86UU9 113 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 ZDHHC17Q8IUH5 632 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 MIER2Q8N344 545 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 COX4I2Q96KJ9 171 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 PPP1R10Q96QC0 940 aaKnown RBP12.39□□□□□ -0.43
HSPG2-211ENST00000486901 SMOQ99835 787 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 TBCDQ9BTW9 1192 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 SLC39A8Q9C0K1 460 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 CRTAC1Q9NQ79 661 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 TBC1D13Q9NVG8 400 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 TMEM181Q9P2C4 612 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 RBPJLQ9UBG7 517 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 CIDEBQ9UHD4 219 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 INVSQ9Y283 1065 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 NDUFAF1Q9Y375 327 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 ACTL7AQ9Y615 435 aa12.39□□□□□ -0.43
HSPG2-211ENST00000486901 GAS2O43903 313 aaKnown RBP12.38□□□□□ -0.43
HSPG2-211ENST00000486901 HMBSP08397 361 aa12.38□□□□□ -0.43
HSPG2-211ENST00000486901 CD86P42081 329 aa12.38□□□□□ -0.43
HSPG2-211ENST00000486901 GSSP48637 474 aa12.38□□□□□ -0.43
HSPG2-211ENST00000486901 PIK3CGP48736 1102 aa12.38□□□□□ -0.43
HSPG2-211ENST00000486901 RAD23AP54725 363 aa12.38□□□□□ -0.43
HSPG2-211ENST00000486901 HECTD2Q5U5R9 776 aa12.38□□□□□ -0.43
HSPG2-211ENST00000486901 CIR1Q86X95 450 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-211ENST00000486901 FBXO30Q8TB52 745 aa12.38□□□□□ -0.43
HSPG2-211ENST00000486901 ELMO1Q92556 727 aa12.38□□□□□ -0.43
HSPG2-211ENST00000486901 C12orf42Q96LP6 360 aa12.38□□□□□ -0.43
HSPG2-211ENST00000486901 HERC2P3Q9BVR0 1158 aa12.38□□□□□ -0.43
HSPG2-211ENST00000486901 HIPK3Q9H422 1215 aa12.38□□□□□ -0.43
HSPG2-211ENST00000486901 FER1L6Q2WGJ9 1857 aa12.38□□□□□ -0.43
HSPG2-211ENST00000486901 SLCO1B7G3V0H7 640 aa12.38□□□□□ -0.43
HSPG2-211ENST00000486901 H2AFYO75367 372 aaKnown RBP12.38□□□□□ -0.43
HSPG2-211ENST00000486901 DAB1O75553 588 aa12.38□□□□□ -0.43
HSPG2-211ENST00000486901 SHMT2P34897 504 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms